Query= MSMg01no182_g12.b1 MSMg01no182_g12.b1 CHROMAT_FILE:
MSMg01no182_g12.b1 PHD_FILE: MSMg01no182_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:08 2005
(299 letters)
>mm_chr4_45199405_45200103
Length = 699
Score = 538 bits (278), Expect = e-157
Identities = 290/294 (98%)
Strand = Plus / Plus
Query: 4 gaattggaggagctgccccccaggaaggtagaaggaaggcaagggtctcagcagggaggt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattggaggagctgccccccaggaaggtagaaggaaggcaagggtctcagcagggaggt 263
Query: 64 cattttcatggaaaggaactggatgaccactggcttgtaaagttcaggtcagcaaggagc 123
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 264 cattttcatggaaaggaactggatgaccactggctagtaaagttcaggtcagcaaggagc 323
Query: 124 atggaatccagtggaagtgcagagcaggcagagccctctgagagcagaagataggcagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atggaatccagtggaagtgcagagcaggcagagccctctgagagcagaagataggcagaa 383
Query: 184 gtgccttggtctccgcttgggatttgggtcctctgagtttcactcttctcatttatcaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgccttggtctccgcttgggatttgggtcctctgagtttcactcttctcatttatcaaa 443
Query: 244 ggaaattaaagatatttgtcaatgcgcaagatagatcgtaggtagaagcgtcta 297
|||||||||||||| |||||||||| ||||||||||| ||||||||||||||||
Sbjct: 444 ggaaattaaagataattgtcaatgcacaagatagatcataggtagaagcgtcta 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_g12.g1 MSMg01no182_g12.g1 CHROMAT_FILE:
MSMg01no182_g12.g1 PHD_FILE: MSMg01no182_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:08 2005
(303 letters)
>mm_chr4_45365062_45365764
Length = 703
Score = 513 bits (265), Expect = e-150
Identities = 283/289 (97%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 actttgtagaccagaatgacctccaactcaggcatcttactaactctgcctctggagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 592 actttgtagaccagaatgacctccaactcaggcatcttactaactctacctctggagtgc 533
Query: 61 tgggattaaaagttgcatgccatcacacctggctgacttacatatttttgtttatagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgggattaaaagttgcatgccatcacacctggctgacttacatatttttgtttatagtta 473
Query: 121 atttgaaaaatccttacaatctggatttaatttacagttgttggctggaggtgttggtct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 472 atttgaaaaatccttacaatctggatttaatttacagttgttggctggaggtgttgatct 413
Query: 181 gtgttagcatgtatgaggactggtttatggttaaacatttcctggatagtagtctagatt 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 412 gtgttagcatgtatgaggactggtttacggttaaacatttcctggatagtagtctagatt 353
Query: 241 tagagaggtttatttctatgtaatctttatgctgaaagcgagat-tttt 288
||||||||||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 352 tagagaggtttatttctatgtcatctttatgctgaaagtgagatctttt 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
