TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTGCTGAGAATTCCGTTTAGCTCTGTACCCCATGTTTTAATTGG
GTTATTTGGTTCTCTGGAGTCCAACTTCTTGAGTTCGTTGTATATATTAG
ATATTAGCCCTCTATCAGATATAGGGTTAGTATATATCTTTTCCCAATCT
GTGAGTTGCCATTTTGTCCTATAGACAGTGTCCTTTTCCTTACAGAACCT
TTTCAATTTCATGAGGTCCCATTTGTCAATTGTTGATCTTAGAGCCTGAG
CCAGTGGTATTATTTTTGTTTGTTTGTTTGTTTTTTGTTTTATTTGTTGN
TTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCANTNNNNNNNTNTTTTTTT
TTTTTTTTCTTCTCCCCCCCACATAAAATAAAAAAATATATACTTGTGGA
GTGGGTTTGTTTTTATTTTATTATTTATATTATTTGTCTTAATTTCGCTT
CTCTAACTTCTTTCCCCTCCTTATTTTTCTTTTTTCTTCTAATCACTCTC
TTTTTCTTTTTTTTTTGTGTTTTGTTATACCCATTTTTCTTCTTATTACC
TCGCTATTGTCTTTCATTAATATTTTTGTTTTTTGTCTATTCTTTTTTTC
TTCTCTACATACTTTCAGCCCACGTAAATTTCTATTCTTCGAAATCTTTT
TTTTATTTATTTTTTTTCGTTACTCACAATCTTGTTCTATATTACTCCAT
CCACCGTCTTTCTGCGA

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTAAATAATTTCAAACATTTAACAAA
GAAACATGGAATATGGTGTGCAGGACTTCCATTCATAGTACATAAATGTC
TCCATTCGAATTCTTCCTTTTGACACGGTAAGGTTGCATGCCCACTCTGT
CCTGAAACTATCCCTACCCAGCCATGTGGATCTTCTCTTTTCTGGCGTTT
GTCTCTCTCTTTATCCATAACTCCATAGTTTGAAACAGATTCCTTTTTAA
TAGAAATTAATAGTGTGATATGTCTGGATTCCAAAATGAAAATTTGATAC
AGTTTTTTCAGTCTTGTGTATTACGCTGCTCTCCCACAGTCTAGATGCAT
AATACGTTGTGCTGCTTCAACCAAAATCAAAAAGTGTGAACTCAAAAAGG
CGCTGTATGATCAAAATGTGCACAAAAATATTTTATATTTTTGATAAAAC
ACTGCACTTTTATTTTTCTCATAGTTATCATATATTTTTAATCTACAAGA
GTAATAAGTATAATTAATTACTATTCTAATCACATACATAAAAAATGCAT
GTCTGCTTCTGGTGCCCTGATTACGAAGCTCTCTTCCAGACTTACAGATC
TGTAAGACATTATTTTTAAGACTTCTTCATGTCTATTTTTACAGGACTAA
AAAGCAGGTGTCAAAGGAAGTAAC

Query= MSMg01no183_c10.g1 MSMg01no183_c10.g1 CHROMAT_FILE:
MSMg01no183_c10.g1 PHD_FILE: MSMg01no183_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:05 2005
         (564 letters)



>mm_chr4_28934958_28935921
          Length = 964

 Score =  984 bits (509), Expect = 0.0
 Identities = 551/565 (97%), Gaps = 2/565 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaataatttcaaacatttaacaaagaaacatggaatatggtgtgcaggacttccattca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaataatttcaaacatttaacaaagaaacatggaatatggtgtgcaggacttccattca 260

                                                                       
Query: 61  tagtacataaatgtctccattcgaattcttccttttgacacggtaagg-ttgcatgccca 119
           ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 261 tagtacataaatgtctccatttgaattcttccttttgacacggtaaggatt-catgccca 319

                                                                       
Query: 120 ctctgtcctgaaactatccctacccagccatgtggatcttctcttttctggcgtttgtct 179
           |||||||||| |||||| |||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 320 ctctgtcctggaactatgcctaaccagccatgtggatcttctcttttctggcttttgtct 379

                                                                       
Query: 180 ctctctttatccataactccatagtttgaaacagattcctttttaatagaaattaatagt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctctctttatccataactccatagtttgaaacagattcctttttaatagaaattaatagt 439

                                                                       
Query: 240 gtgatatgtctggattccaaaatgaaaatttgatacagttttttcagtcttgtgtattac 299
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| 
Sbjct: 440 gtgatatgtctggattccaaaatgaaaatttgatacagttttcccagtcttgtgtattaa 499

                                                                       
Query: 300 gctgctctcccacagtctagatgcataatacgttgtgctgcttcaaccaaaatcaaaaag 359
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gttgctctcccacagtctagatgcataatacgttgtgctgcttcaaccaaaatcaaaaag 559

                                                                       
Query: 360 tgtgaactcaaaaaggcgctgtatgatcaaaatgtgcacaaaaatattttatatttttga 419
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 560 tgtgaactcaaaaaggcgctgtatgatcaaaatgtccacaaaaatattttatatttttga 619

                                                                       
Query: 420 taaaacactgcacttttatttttctcatagttatcatatatttttaatctacaagagtaa 479
           ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 taaaacaatgaacttttatttttctcatagttatcatatatttttaatctacaagagtaa 679

                                                                       
Query: 480 taagtataattaattactattctaatcacatacataaaaaatgcatgtctgcttctggtg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taagtataattaattactattctaatcacatacataaaaaatgcatgtctgcttctggtg 739

                                    
Query: 540 ccctgattacgaagctctcttccag 564
           |||||||||||||||||||||||||
Sbjct: 740 ccctgattacgaagctctcttccag 764


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space:   528516
Effective search space used:   528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)