Query= MSMg01no187_d03.b1 MSMg01no187_d03.b1 CHROMAT_FILE:
MSMg01no187_d03.b1 PHD_FILE: MSMg01no187_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:26 2005
(163 letters)
>mm_chr4_138179160_138179721
Length = 562
Score = 281 bits (145), Expect = 2e-80
Identities = 156/160 (97%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 4 ggaatttgccctgnatgtggctaggccctccctgtgttcagaacaatgctggacctgtta 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaatttgccctggatgtggctaggccctccctgtgttcagaacaatgctggacctgtta 263
Query: 64 gaggttatagccctgaccagtcactaacagagtaacaaatggctctgctgttctggtgct 123
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaggttatagcccagag-agtcactaacagagtaacaaatggctctgctgttctggtgct 322
Query: 124 gtgtgccttgagtatctaagttaatgctctgagccttagc 163
||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtgtgccttgagtatctaagttaatgctctgagccttagc 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 562
Length adjustment: 8
Effective length of query: 155
Effective length of database: 554
Effective search space: 85870
Effective search space used: 85870
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no187_d03.g1 MSMg01no187_d03.g1 CHROMAT_FILE:
MSMg01no187_d03.g1 PHD_FILE: MSMg01no187_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:26 2005
(217 letters)
>mm_chr4_138222358_138222973
Length = 616
Score = 412 bits (213), Expect = e-120
Identities = 216/217 (99%), Gaps = 1/217 (0%)
Strand = Plus / Minus
Query: 1 tcacctatggtcagcactcacagaacgctgtacccctcccccttacttctcgagtcccgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 416 tcacctatggtcagcactcacagaacgctgtacccctcccccttacttct-gagtcccgc 358
Query: 61 aaggccaggttctgtggctgccaaggctgacatccatcttcctgcctgctcggatgatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aaggccaggttctgtggctgccaaggctgacatccatcttcctgcctgctcggatgatgt 298
Query: 121 cctttcttgtcctctaaacagctggccaaggatgagtcacttccccaggagaggcatatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cctttcttgtcctctaaacagctggccaaggatgagtcacttccccaggagaggcatatc 238
Query: 181 ttacagaggggaaggagaggcgcatgggggtagggtg 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttacagaggggaaggagaggcgcatgggggtagggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 616
Length adjustment: 9
Effective length of query: 208
Effective length of database: 607
Effective search space: 126256
Effective search space used: 126256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
