Query= MSMg01no189_a19.b1 MSMg01no189_a19.b1 CHROMAT_FILE:
MSMg01no189_a19.b1 PHD_FILE: MSMg01no189_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:55 2005
(302 letters)
>mm_chr4_152876318_152877020
Length = 703
Score = 561 bits (290), Expect = e-164
Identities = 299/302 (99%), Gaps = 1/302 (0%)
Strand = Plus / Minus
Query: 1 ctaagtgttcaacttgattatcaagagtccagccagggtccaaacatgtgtggattccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctaagtgttcaacttgattatcaagagtccagccagggtccaaacatgtgtggattccta 443
Query: 61 gaggactttcatgcactgaatcttgtggttatgagacttatgtcactgtttctataatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaggactttcatgcactgaatcttgtggttatgagacttatgtcactgtttctataatgt 383
Query: 121 ggtgggatgtccaagggggaaggttcttagttgattgtctgggctgcggggacccaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 382 ggtgggatgtccaagggggaaggttcttagttgattgtctgggctgcggggacccagaaa 323
Query: 181 ggagctaggactcactccctgagtgtgcatcacacacatttctcggtagctacccatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggagctaggactcactccctgagtgtgcatcacacacatttctcggtagctacccatgtt 263
Query: 241 ccttgttcctgctcagccacctgtgtctctcacttccttttgggta-gaaaaggaaaatg 299
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 262 ccttgttcctgctcagccacctgtgtctctcacttccttttgggtaagaaaaggaaattg 203
Query: 300 ta 301
||
Sbjct: 202 ta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 703
Length adjustment: 9
Effective length of query: 293
Effective length of database: 694
Effective search space: 203342
Effective search space used: 203342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_a19.g1 MSMg01no189_a19.g1 CHROMAT_FILE:
MSMg01no189_a19.g1 PHD_FILE: MSMg01no189_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:55 2005
(295 letters)
>mm_chr4_152833981_152834675
Length = 695
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%)
Strand = Plus / Plus
Query: 1 tccgtgtggccacccagccctgtgactcacactggatctgtgcaaaatctgtgtttgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccgtgtggccacccagccctgtgactcacactggatctgtgcaaaatctgtgtttgaaa 260
Query: 61 acgctggatgtcaaaaaaggaagagcagaggcagaccgcacgacagaaataggcccgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgctggatgtcaaaaaaggaagagcagaggcagaccgcacgacagaaataggcccgtgg 320
Query: 121 agacagagacgaagcgagcctttcttttgcaccaaactctttgccagggatccaaaaatc 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 agacagagacgaagcgagcctttcttttgcaccaaactctctgccagggatccaaaaatc 380
Query: 181 ccgggcaggagggaggagaagatacggcctgagcatcctgcagcctcctgggatagccac 240
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaggcaggagggaggagaagatatggcctgagcatcctgcagcctcctgggatagccac 440
Query: 241 tgcagcctctccttgaccctgagcccaggaagggccctgagcccagcagg 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcagcctctccttgaccctgagcccaggaagggccctgagcccagcagg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
