Query= MSMg01no189_b05.b1 MSMg01no189_b05.b1 CHROMAT_FILE:
MSMg01no189_b05.b1 PHD_FILE: MSMg01no189_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:57 2005
(314 letters)
>mm_chr4_117886228_117886944
Length = 717
Score = 592 bits (306), Expect = e-173
Identities = 311/314 (99%), Gaps = 3/314 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcccatgtgaactgctgtccagggtcaatggactgccagaaatggaagaaaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcccatgtgaactgctgtccagggtcaatggactgccagaaatggaagaaaca 263
Query: 64 gggaaagtgagggccaagtcgtgggaggcctatccatggtgctttgcagccaagtaacac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gggaaagtgagggccaagtcgtgggaggcctatccatggtgctttgcagccaagtaacac 323
Query: 124 ctacattccccagcccaagtctggaaagagataaattgaagactcaaacttccatggcag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctacattccccagcccaagtctggaaagagataaattgaagactcaaacttccatggcag 383
Query: 184 ccccttgtagagcttatgaagaccaggtgggtcatgggtcaggccctgcatccaaccagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccccttgtagagcttatgaagaccaggtgggtcatgggtcaggccctgcatccaaccagt 443
Query: 244 ggaatgagatggagataatgatgatgatgatgatg---cggccacctgggctgtgctgga 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 ggaatgagatggagataatgatgatgatgatgatgatgcggccacctgggctgtgctgga 503
Query: 301 gactgactgtccaa 314
||||||||||||||
Sbjct: 504 gactgactgtccaa 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 717
Length adjustment: 9
Effective length of query: 305
Effective length of database: 708
Effective search space: 215940
Effective search space used: 215940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_b05.g1 MSMg01no189_b05.g1 CHROMAT_FILE:
MSMg01no189_b05.g1 PHD_FILE: MSMg01no189_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:57 2005
(365 letters)
>mm_chr4_118030702_118031465
Length = 764
Score = 675 bits (349), Expect = 0.0
Identities = 361/365 (98%), Gaps = 1/365 (0%)
Strand = Plus / Minus
Query: 1 cacaccccttaccccataaaaccccctagctttcgagcctcgtggtcaacctccgttatc 60
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 762 cacaccccttaccccataaaaccccctagctttcgagcctcgtggccaacatccgttatc 703
Query: 61 tcctgtgtgggatgcatgtcggtctggagctctgtaattaaacgacctcatgtaattaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tcctgtgtgggatgcatgtcggtctggagctctgtaattaaacgacctcatgtaattaca 643
Query: 121 tcgagatggtccttcgtgatttttttgggcgcacgctgaatcgggaatggagtgggggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tcgagatggtccttcgtgatttttttgggcgcacgctgaatcgggaatggagtgggggtt 583
Query: 181 tccccactaggtctatcagttgatctcagaagagtataacggagtctttataagtaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tccccactaggtctatcagttgatctcagaagagtataacggagtctttataagtaaagg 523
Query: 241 gccctgctgatccgggcagctgctctatagctggttacttatctcacctgtaaagcctct 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gccctgctgacccgggcagctgctctatagctggttacttatctcacctgtaaagcctct 463
Query: 301 tgtgtttcttgaaacaaatttgaacaaatctttcatttacaaaaacacatgatttcaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 462 tgtgtttcttgaaacaaatttgaacaaatctttcatttacaaaaacaca-gatttcaaaa 404
Query: 361 ataca 365
|||||
Sbjct: 403 ataca 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 764
Length adjustment: 9
Effective length of query: 356
Effective length of database: 755
Effective search space: 268780
Effective search space used: 268780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
