Query= MSMg01no190_b17.b1 MSMg01no190_b17.b1 CHROMAT_FILE:
MSMg01no190_b17.b1 PHD_FILE: MSMg01no190_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:15 2005
(654 letters)
>mm_chr4_102364079_102365133
Length = 1055
Score = 1154 bits (597), Expect = 0.0
Identities = 630/641 (98%), Gaps = 1/641 (0%)
Strand = Plus / Minus
Query: 15 cctgttagcttgcctgcttcctgccaggacaataacatgtttgcaacggcttgggtcaaa 74
|||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 855 cctgctagcttgcctgcttcctgccaagacaataacatgtttgcaacagcttgggtcaaa 796
Query: 75 agtgtgttaagagcatgtgatcatattatatctatagaatatggaaacaaaattttaagg 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 agtgtgttaagagcatgtgatcatattatatctatagaatatggaaacaaaattttaagg 736
Query: 135 atctattcacctcataaaattttccacatcatttacagaaaatagttttaaattattggt 194
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 atctattcacctcataagattttccacatcatttacagaaaatagttttaaattattggt 676
Query: 195 aagaaagcttccctatggaagtactagattttatataattccttagcttgtggatatgca 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aagaaagcttccctatggaagtactagattttatataattccttagcttgtggatatgca 616
Query: 255 gacaccagtgtacacattttatgataagaacatatcatgagaagtaaatgcttaggtgac 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gacaccagtgtacacattttatgataagaacatatcatgagaagtaaatgcttaggtgac 556
Query: 315 ttcttcattgtgcggccattataaacctagcataaacctagatttcatcgttgtaatcag 374
|||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 555 ttcttcattgtgtggccattataaacctagcataaacctagatttcatggctgtaatcag 496
Query: 375 actggtctcccacaaactgagatgtaatccatcagccgagtgtggcttgatagaatcaag 434
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 495 actggtctcccacaaactgagatgtaatccatcagccgagtgtggcttgattgaatcaag 436
Query: 435 ggatgagataagcaggagatatgagaagctgctgcccaggcaacacagatttctatcttc 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggatgagataagcaggagatatgagaagctgctgcccaggcaacacagatttctatcttc 376
Query: 495 gtgctaaacactatctattgcttctctgccttttgactgacatcaaatttagtaaatatc 554
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 375 gtgctaaacactatctattgcttctctgccttttgactgacatcgaatttagtaaatatc 316
Query: 555 ttttataaataaaagtaaatgttggtacagcaataaaattatagtacaataaatacaaaa 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttttataaataaaagtaaatgttggtacagcaataaaattatagtacaataaatacaaaa 256
Query: 615 gacagg-ttcttagtcaattatcattatcacgttggtatgt 654
|||||| |||||||||||||| |||||||||||||||||||
Sbjct: 255 gacaggtttcttagtcaattaacattatcacgttggtatgt 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_b17.g1 MSMg01no190_b17.g1 CHROMAT_FILE:
MSMg01no190_b17.g1 PHD_FILE: MSMg01no190_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:15 2005
(274 letters)
>mm_chr4_102262517_102263190
Length = 674
Score = 530 bits (274), Expect = e-155
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1 tttcaaagggatctgtggattgtggcaagaagagcttccaaaatgcctgaggcaaactat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcaaagggatctgtggattgtggcaagaagagcttccaaaatgcctgaggcaaactat 260
Query: 61 ttattatctgtttcttggggttatatcaaggtgggttaatctgattgtgttctgtgtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattatctgtttcttggggttatatcaaggtgggttaatctgattgtgttctgtgtctc 320
Query: 121 tgatagaatgtgattgttttatgtccctctgtatttcatggagtggacggcatgagcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatagaatgtgattgttttatgtccctctgtatttcatggagtggacggcatgagcagt 380
Query: 181 ggtttaatttgtatgtacggttagcccacaggtgcttcttaaaatgaaataagacatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtttaatttgtatgtacggttagcccacaggtgcttcttaaaatgaaataagacatgtt 440
Query: 241 ttcttgccttgtattttaatgtactgtaatgtgt 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcttgccttgtattttaatgtactgtaatgtgt 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
