Query= MSMg01no192_h06.b1 MSMg01no192_h06.b1 CHROMAT_FILE:
MSMg01no192_h06.b1 PHD_FILE: MSMg01no192_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:50 2005
(420 letters)
>mm_chr4_56120179_56120999
Length = 821
Score = 731 bits (378), Expect = 0.0
Identities = 396/402 (98%), Gaps = 1/402 (0%)
Strand = Plus / Plus
Query: 16 gaattc-attaatcagaaaaaaatatcttcaatacatttttaatgtgtcatgtgattttc 74
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattcaattaatcaggaaaaaatatcttcaatacatttttaatgtgtcatgtgattttc 275
Query: 75 aaatgaatgcttctgtctgccccataaatctttgaaaaagagacccagaataacattgtt 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaatgaatgcttctgtctgccccataaatctttgaaaaagagacccagaataacattgtt 335
Query: 135 tcattgtttcatatcaaataaagtggaggtcacaaactcatctttaataaattcactgtc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tcattgtttcatatcaaataaagtggaggtcacaaactcatctttaataaattcactgtc 395
Query: 195 tgaaaataagatataagggtaatttactgtgacccaggtcaacatagtcattgaatgttt 254
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 396 tgaaaataagatataagggtaatttactgtgacccaggtcaacatagtcattaaacgttt 455
Query: 255 ctctacagtacagaggatgaatcagattataacagagagaatatttagaccattgtttgc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctctacagtacagaggatgaatcagattataacagagagaatatttagaccattgtttgc 515
Query: 315 tgaaaattataatatattacatattaaatttataaaaagtttatgatttaataataagca 374
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 516 tgaaaattataatatattacatattaaatttataaaaagttcatgatttaataaaaagca 575
Query: 375 taaaattccacaatatgtgcttgagaggcctagactcactga 416
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 taaaattccacaatatgtgcttgagaggcctagactcactga 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 821
Length adjustment: 9
Effective length of query: 411
Effective length of database: 812
Effective search space: 333732
Effective search space used: 333732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_h06.g1 MSMg01no192_h06.g1 CHROMAT_FILE:
MSMg01no192_h06.g1 PHD_FILE: MSMg01no192_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:50 2005
(322 letters)
>mm_chr4_56268374_56269093
Length = 720
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%), Gaps = 2/318 (0%)
Strand = Plus / Minus
Query: 1 tccttagtggctcctgccaattccaaggcccacttccctcggcctctgccacggcaagcc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tccttagtagctcctgccaattccaaggcccacttccctcggcctctgccacggcaagcc 457
Query: 61 actcctcttatctcttcaggtcatcctcacagctcccagatggtatggctcgccttgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 actcctcttatctcttcaggtcatcctcacagctcccagatggtatggctcgccttgcct 397
Query: 121 ttgtccttgatgcgacttctgcctcgttcctgttcttcctctaccttctctctgctctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttgtccttgatgcgacttctgcctcgttcctgttcttcctctaccttctctctgctctga 337
Query: 181 gatagcccttcactgtgagcctctgggagaaggtttttccttccctcgtcccttgtccct 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 336 gatagcccttcactgtgagcctctgggagaagg-ttttccttccctcgtcccttgtccct 278
Query: 241 ctgcttccctctcttttgtcctgttgcttgcccacaggttgaatcttgttgcctgatgaa 300
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 277 ctgcttccctctcttctgtcctgttgcttgcccacaggttgaatcttgttgcct-atgaa 219
Query: 301 tctcttcccaggcttcag 318
||||||||||||||||||
Sbjct: 218 tctcttcccaggcttcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 720
Length adjustment: 9
Effective length of query: 313
Effective length of database: 711
Effective search space: 222543
Effective search space used: 222543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
