Query= MSMg01no193_p05.b1 MSMg01no193_p05.b1 CHROMAT_FILE:
MSMg01no193_p05.b1 PHD_FILE: MSMg01no193_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:41 2005
(314 letters)
>mm_chr4_127145278_127145990
Length = 713
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttcccaaggcaggactccaggcggatcagagctgacatggagcttgaacttgc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttcccaaggcaggactccaggcggatcagagctgacatggagcttgaacttgc 263
Query: 64 tgctatctggggtccagatattccccctaggtcctctcagcacgcagagagtttttttcc 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgctatctggggtccagatat-ccccctaggtcctctcagcacgcagagagtttttttcc 322
Query: 124 ttctcttgttctcttagcctttctaaggaaaatctcgtcggtgctctgtgctctcatgag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttctcttgttctcttagcctttctaaggaaaatctcgtcggtgctctgtgctctcatgag 382
Query: 184 tccccagcctcttatagctctctcaaaaccacactgagttctcttctgttgagcattttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tccccagcctcttatagctctctcaaaaccacactgagttctcttctgttgagcattttt 442
Query: 244 gatagtctgaggataccagtcaacgtattgtgagagagaactgccctaaacacgagctgt 303
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 443 gatagtctgaggataccagtcaacgtattgtgagagagaactgccctaaacatgagctgt 502
Query: 304 ccattctcaga 314
|||||||||||
Sbjct: 503 ccattctcaga 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_p05.g1 MSMg01no193_p05.g1 CHROMAT_FILE:
MSMg01no193_p05.g1 PHD_FILE: MSMg01no193_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:41 2005
(342 letters)
>mm_chr4_127293735_127294476
Length = 742
Score = 588 bits (304), Expect = e-172
Identities = 334/346 (96%), Gaps = 5/346 (1%)
Strand = Plus / Minus
Query: 1 caaaccaacctgagatctgtagcaagacccaaaccaaacaagcaaaggatgacagactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 caaaccaacctgagatctgtagcaagacccaaaccaaacaagcaaaggatgacagactca 292
Query: 61 gtttgaggaggctctgtctatctaggtttgggacaaataaagtgtaacgaaggataatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gtttgaggaggctctgtctatctaggtttgggacaaataaagtgtaacgaaggataatgg 232
Query: 121 tgagtaggtggacagatatcatgatgtgttactacaatttcagcactcataagggacaca 180
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 231 tgagtaggtggacagatatcatgatgtgttactacaattccagcactcagaagggacaca 172
Query: 181 caggaagatagagtttgagactatctttgactgcatggagagaccctgtctataaagaaa 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 171 caggaagatagagtttgagactatctttgactgcatggagagaacctgtctataaagaaa 112
Query: 241 ttaaaacaggtttggagagaggactccgcggttaggagcactgact--tct---ataggt 295
|||||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||
Sbjct: 111 ttaaaacagggttggagagaggactccgcggttaggagcactgactgctcttccagaggt 52
Query: 296 cctgagttcaaatcccagcaatcacatggtggctcacaaccatctg 341
||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 51 cctgagttcaaatcctagcaaccacatggtggctcacaaccatctg 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
