CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTTCTCATTCCGTTTTTTTGATTGCTTGTTGCTCATGTAATAGA
AATGCAACATGCAACCAGGTTTGGGATGGGGAAACTTTTCTGAGGGTTTT
GTTCTGTGGGGATGGGGTAGAGAATTGAGCATAATTTACTTTAATACCAT
TGATTCGGTCTTCAAAAACCATTCCTACCAGCTGTGTGAACAGCACCCAT
TGCTCCACTGGGTTCAAAATTTGTGGCTATCCAACTTGCACCTCTTTTCT
ACTCTCAGAGATGGGAAGCATTTCCATGTTGTTTGTCTTCATTTTCATAG
CCTGAATTAGTAAATAAGTTTGTGAATATTTTCATTTGTTCATTGGTGAT
ATAAATTTCTCCTACAGCTCATGTATTACAATACTTTGTCTACATTGGTA
GTCTTTTATAAAAAATCCTGGCACTTCTTTTGTCTCAACGTTGATTTATA
TCTTTTTACATTTTTAAGCTGCAGTTGAAAATCTGGATGAGTATAATAGG
GTAATAAATTTTTGTATTTAATGGTCTTTGAAATTAAAATCTCTAATTAG
AATTGTTATTGTATTAGGAAAATGTGCATATAAAATATATCATTAGAAGC
TGANAGTAAACCAAAAGTCTGGAAGAAATAAATTATTAAACATATATTTA
ATAAATGACAAGTATCCAGAATATACAAAAAGAAATTACACCCTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCCTTGACTCTTTCAAGAAACATG
TCCAATCAAATTTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGACAGGGTTACTCT
GTATAGCCCTGGCTATCCTGGAACTCACTGTAGACCAACCTGGTCTCAAA
CTCAGAAATCCTCCTGTCTCTGCCTACCGAATGCTGGGATTAAAGGCATG
CGCCACCATGCTTTGGTTCTTCCCCCCCCCCCCAAAGCAAAGGTACTCTG
ATTTTCTTCTTGGAGAGAACCATATGTATAAAAAAGAAGGATTGCTGCTT
AGAAGTCGGGAGCACGGGGAATGGCGACTCAGACTGGAATCTGGGAAAGT
CAGTGAGCTGTGGTTTTACCCAGAGGACATGAAATGGAAGAAGTAGAAGG
AAAAAGGCTGACCTACCAAAAACAGGGCCACTGCGGTGCCCAGGATGAAG
CCGGCGATCACGTCGGAACAGTGGTTCCGGTACTCTGAGACGCGTTTGAG
GCCTGTCAGGAAGGCGGTACAGAGGGTCCCCAAGCACAGCACTGGCTTGG
CCAGACGACTGCTCTTCGTCTTGATTGCGCTTGTGATGAAAATTT

Query= MSMg01no194_p19.b1 MSMg01no194_p19.b1 CHROMAT_FILE:
MSMg01no194_p19.b1 PHD_FILE: MSMg01no194_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:02 2005
         (695 letters)



>mm_chr4_49215552_49216645
          Length = 1094

 Score = 1247 bits (645), Expect = 0.0
 Identities = 680/692 (98%), Gaps = 2/692 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcttctcattccgtttttttgattgcttgttgctcatgtaatagaaatgcaac 63
           |||||||||||||||||  |||||| |||||||||||||| |||||||||||||||||||
Sbjct: 204 ggaattctcttctcatt-tgtttttctgattgcttgttgcgcatgtaatagaaatgcaac 262

                                                                       
Query: 64  atgcaaccaggtttgggatggggaaacttttctgagggttttgttctgtggggatggggt 123
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 263 atgcaaccaggtttgggatggggaaacttttcttagggttttgttctgtggggatggggt 322

                                                                       
Query: 124 agagaattgagcataatttactttaataccattgattcggtcttcaaaaaccattcctac 183
           ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 323 agagaattgagcataatttactttaataccattgattcgctcttcaaaaactattcctac 382

                                                                       
Query: 184 cagctgtgtgaacagcacccattgctccactgggttcaaaatttgtggctatccaacttg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cagctgtgtgaacagcacccattgctccactgggttcaaaatttgtggctatccaacttg 442

                                                                       
Query: 244 cacctcttttctactctcagagatgggaagcatttccatgttgtttgtcttcattttcat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cacctcttttctactctcagagatgggaagcatttccatgttgtttgtcttcattttcat 502

                                                                       
Query: 304 agcctgaattagtaaataagtttgtgaatattttcatttgttcattggtgatataaattt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agcctgaattagtaaataagtttgtgaatattttcatttgttcattggtgatataaattt 562

                                                                       
Query: 364 ctcctacagctcatgtattacaatactttgtctacattggtagtcttttataaaaaatcc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctcctacagctcatgtattacaatactttgtctacattggtagtcttttataaaaaatcc 622

                                                                       
Query: 424 tggcacttcttttgtctcaacgttgatttatatctttttacatttttaagctgcagttga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tggcacttcttttgtctcaacgttgatttatatctttttacatttttaagctgcagttga 682

                                                                       
Query: 484 aaatctggatgagtataatagggtaataaatttttgtatttaatggtctttgaaattaaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaatctggatgagtataatagggtaataaatttttgtatttaatggtctttgaaattaaa 742

                                                                       
Query: 544 atctctaattagaattgttattgtattaggaaaatgtgcatataaaatatatcattagaa 603
           |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 743 atctctaattagaattgttattgtgttaggaaaatgtgcatataaa-tatatcattagaa 801

                                                                       
Query: 604 gctganagtaaaccaaaagtctggaagaaataaattattaaacatatatttaataaatga 663
            |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 802 actgaaagtaaaccaaaagtctggaagaaaaaaattattaaacatatatttaataaatga 861

                                           
Query: 664 caagtatccagaatatacaaaaagaaattaca 695
           ||||||||||||||||||||||||||||||||
Sbjct: 862 caagtatccagaatatacaaaaagaaattaca 893


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1094
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1084
Effective search space:   742540
Effective search space used:   742540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)