CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTGAAGGTAATGTGAGTTGTTTACTTCCCCTTCTATGAAGCTTTC
CTGTTGGATTGAGTCTTTCACTCTTCCAGGAAATTGCTACAAAACAATGG
TCTCCACTGTTAATGTGATGCATTCCAGTAAAAGATTGTTAGAAAGGACT
TAAGGTAGTTTTGGTTTTGTTGTGTTTTCTCTTGAGTCATCACAGTCAAA
CAATGGTCTGAGTGTTCCTGATCTTCTATATAGGGCATATGCTCCATATG
AGGACACCACACCTCATTTTTTGAGTGTGTTATTAGAGAGTATTTGTAAA
CACTCATTTGTCCTCATCTGCAAAAACCTTCTTCCTTTCCTCACACCAGT
GATGCTCTATCACTTATGTCCTTAATAACAAATCCCCGTAAGCAGTCCCT
TTAAAATATGTTCTGAACATGATCACTTCTCAAACGTTCCTAGATATAAT
ATATATATCTGTTTCAACATTATTGACTGTATGGATTTCTGTTTCTAGTA
AGTTTCCCATCCCCTCAGTGTTGTCACTACTCAGCAGAGAGCATAGTCTC
TTCCGATAGAAATCAGATCATTCAGCTCTCCGATGTACATATTATGATAG
CTTCCGATCACCTTTCGGCCAGGATCCAAATATCTTTACTATCATCTCAC
TGTGGCTACTTCTCAGACAG

GTGGAGGAGGGGGCCCCGGGGGGAAAGTATTCTCTTTGTCATATGGAAAN
NAGGTGTGTTGGCTGGGTGTTGGCGTTGGTGGTGGGTTGGTTTGTTGACG
CTTCCCGGTGTTAGACATGGGGGAACCGGGGTACCGCATTATAATATTTT
TTTTTCGTGGTTATTTGGAAGTAGGGTGACGGGNTTTTTTTTCCCGTTTT
TTTTTTGTTTAAGAAGAAAAATAATGAATGTTTATTTTCATTTTATTTGT
TATCGTCTTTTTTTTTTATATTTTTCTTTGCCCGGTATGTAAAGTTATAG
TGACGATTTATTAATAAATTGTTTTTTTGATATTTGTTTTATTTTTTATG
GTTGTGTTTTGTTTTAATTAAATTTATTTAATATAGTAAACTGTTTTATT
TTTGTACAACCTCATATCTTTAACTTATATCGCCGTTTATGTGTTTTGTT
TCATCTTTTTTTTTTTTTTTTGGAGCGTGTTTAATCGAGATGTATAAAAG
CAACCGCACCCTTTTTTTTTTTTCTCCCCCCCCCCCTCCCCGGTAATTTA
TGATTGTTGTTCTTTTTGTGTTTGTGTTTTATTACCCCCCCCCATAAAAA
CACTAAAAAAAAAATTTGGTGTGGGTCTAAGATTTGGGGTGTGCATTAAC
ATATTGTAACAATTTATTTTGTTTTGTTTCTTTGTATTTGGGATATGTGA
TTTGTTGTTTAGGTGGATATATTCTGTATCTTTTTTTTTTGTTTTTGCGA
TGCAAGTTACATGAGTAAAAAGTTGTTTGTATAAAGTATTAGTGTCTAAT
ATTTATATTTTATATACGAAATCCGTATTTTGTTTGGGGGATGTGTTCCG
TAACGTCACCATTTTGTTTATATGTTGGTCTCCTATTTTTGAGTGAAGTT
GATAGGGCTCAATGATATTTATTTATGAGGGTTACATAATAAGAGTAAAA
AGAAGTGCGCGTGGGGTGTAGTATGATACACAATAATGTAATAAACATAC
TGATAATGATTTATTTGTTATGATATG

Query= MSMg01no201_l04.b1 MSMg01no201_l04.b1 CHROMAT_FILE:
MSMg01no201_l04.b1 PHD_FILE: MSMg01no201_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:07 2005
         (580 letters)



>mm_chr4_77639989_77640966
          Length = 978

 Score = 1073 bits (555), Expect = 0.0
 Identities = 571/577 (98%), Gaps = 2/577 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctgaaggtaatgtgagttgtttacttccccttctatgaagctttcctgttgga 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgaaggtaatgtgagttgtttacttccccttctatgaagctttcctgttgga 263

                                                                       
Query: 64  ttgagtctttcactcttccaggaaattgctacaaaacaatggtctccactgttaatgtga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgagtctttcactcttccaggaaattgctacaaaacaatggtctccactgttaatgtga 323

                                                                       
Query: 124 tgcattccagtaaaagattgttagaaaggacttaaggtagttttggttttgttgtgtttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgcattccagtaaaagattgttagaaaggacttaaggtagttttggttttgttgtgtttt 383

                                                                       
Query: 184 ctcttgagtcatcacagtcaaacaatggtctgagtgttcctgatcttctatatagggcat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctcttgagtcatcacagtcaaacaatggtctgagtgttcctgatcttctatatagggcat 443

                                                                       
Query: 244 atgctccatatgaggacaccacacctcattttttgagtgtgttattagagagtatttgta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgctccatatgaggacaccacacctcattttttgagtgtgttattagagagtatttgta 503

                                                                       
Query: 304 aacactcatttgtcctcatctgcaaaaaccttcttcctttcctcacaccagtgatgctct 363
           ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 504 aacactcatttgtcctcatctgcaaaaacctacttcctttcctcacaccaatgatgctct 563

                                                                       
Query: 364 atcacttatgtccttaataacaaatccccgtaagcagtccctttaaaatatgttctgaac 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atcacttatgtgcttaataacaaatccccgtaagcagtccctttaaaatatgttctgaac 623

                                                                       
Query: 424 atgatcacttctcaaacgttcctagatataatatatatatctgtttcaacattattgact 483
            |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 624 ctgatcacttctcaaacgttcctagatataatatatat--ctgtttcaacattattgact 681

                                                                       
Query: 484 gtatggatttctgtttctagtaagtttcccatcccctcagtgttgtcactactcagcaga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gtatggatttctgtttctagtaagtttcccatcccctcagtgttgtcactactcagcaga 741

                                                
Query: 544 gagcatagtctcttccgatagaaatcagatcattcag 580
           |||||||||||||||||||||||||||||||||||||
Sbjct: 742 gagcatagtctcttccgatagaaatcagatcattcag 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 978
Length adjustment: 10
Effective length of query: 570
Effective length of database: 968
Effective search space:   551760
Effective search space used:   551760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)