TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAATGCACATGCGGTGATAACAAAACCTTCTACTAGTCTCCAGTTT
CCATGGAGCTGGATGAACACCTGTACTCCCTCCGCTCCCCGATTAGAACA
ACAATATGGATGTACGCATCTTCATTCTCTGGCACCATGCCAAAGGAGTC
CCACTACATCATAGGATTTAAATAAAATCCATAGACTCATTAAAGTCAGA
AGCCAATGCATGAGTATCCAAAGGTTTTTGCAAGCCTCTTATGTGATTAT
TAGTAGCATGAACTCAGACACTGTGGGAGTATTTACAGCACAGAAATGAA
AAAGCATTATAATATAGACCATTCCATTCCAAGAGTAGTTTACAGCATAT
AACCAAACAAGTCGCCCGAGTTATAGAGTTATTCATGTTTTGATCTCTGC
CACATATCTCACCATCAACATCTCTTAATCGTGAGACATTTAAATCTTTC
AACAAGAGTTAAAGTGTTCAAGTCTATGAATACACTGTGTTCTCCTCTTG
CCTCTGTTTGTGTGTGTGTGTGTGTGTGTGTACGTGTGTGTGTGTGCCCT
CAAATGCCACGAGCACTACCATTTCACTGCCTCCGCCATCGTCTTTGTAT
ACATTGGCATCTTCAGATCTTCTGTTATGTCTTGGTATACTAATAACTAC
TTACATTTTCTGTTAATGGCACATGCTACATTGCACTGAAATTCCTA

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTCAACAAATGTTGTAAAACTGA
ATCCAACACTTCTAACAGACCATTTTAAAACCAAACATCGCAACACAATA
CACAGATACGCTAATTTGATGCATGTTAGGGAATGACAGTAGGAAAATAT
TAGAAGCTGTTGCTTCCAATAATTAAGCTACTATGTTTATCCAAGAGCAG
AAAACTTCTGATGTAGAATAAAGAGATTGAAATTCATCTTGTGCCACAGT
GATTGATAGTTGGGGTGTTTCTGGCAGTGATGTTGACGTTGCATGGGATG
ATGTATATGCAGTGTCATGTGAACATGTGCGATTTTTCTTTTTTTGGATA
TTTCTTTACTTACATTTCAAATGTTATCCCCTTTCCAGGTCTCCCCTCCA
GAAACCCCCTATCACACCCCATCCCCCTGCCTCTATGAGGGTGCTCCCCC
ACCCAACTCACCTACTCCTGCCTTCCCGCCCTGGCATTCTCCTACACCAG
AGCATCAAACCCACCTCAGGCCAAAGGGCCTCAGCACCTAGGGTGCAGTA
ATGTTGTGCATGGCAAGTGCACCAGGAACACCCTGGATTCATTACACTTT
TAATTTTGAATTAATTCTTGTGTGTGTATGTGTGTGTGCGTGTGTGTGTT
TNNCTTCNNTTTTTTTTCCTCTCCCCCTCTCTT

Query= MSMg01no216_j23.b1 MSMg01no216_j23.b1 CHROMAT_FILE:
MSMg01no216_j23.b1 PHD_FILE: MSMg01no216_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:42 2005
         (703 letters)



>mm_chr4_15775874_15776976
          Length = 1103

 Score = 1280 bits (662), Expect = 0.0
 Identities = 691/704 (98%), Gaps = 6/704 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaatgcacatgcggtgataacaaaaccttctactagtctccagtttccatggag 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gaattccaatgcacatgcagtgataacaaaaccttctactagtctccagtttccatggag 258

                                                                       
Query: 65  ctggatgaacacctgtactccctccgctccccgattagaacaacaatatggatgtacgca 124
           ||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 259 ctggacgaacacctgtactccctccgctccccgattagaacaacaatatggctgaacgca 318

                                                                       
Query: 125 tcttcattctctggcaccatgccaaaggagtcccactacatcataggatttaaataaaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcttcattctctggcaccatgccaaaggagtcccactacatcataggatttaaataaaat 378

                                                                       
Query: 185 ccatagactcattaaagtcagaagccaatgcatgagtatccaaaggtttttgcaagcctc 244
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccatagactcactaaagtcagaagccaatgcatgagtatccaaaggtttttgcaagcctc 438

                                                                       
Query: 245 ttatgtgattattagtagcatgaactcagacactgtgggagtatttacagcacagaaatg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttatgtgattattagtagcatgaactcagacactgtgggagtatttacagcacagaaatg 498

                                                                       
Query: 305 aaaaagcattataatatagaccattccattccaagagtagtttacagcatataaccaaac 364
           |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 499 aaaaagcattataaaatagaccattccattcgaagagtagtttacagcatataaccaaac 558

                                                                       
Query: 365 aagtcgcccgagttatagagttattcatgttttgatctctgccacatatctcaccatcaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aagtcgcccgagttatagagttattcatgttttgatctctgccacatatctcaccatcaa 618

                                                                       
Query: 425 catctcttaatcgtgagacatttaaatctttcaacaagagttaaagtgttcaagtctatg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 catctcttaatcgtgagacatttaaatctttcaacaagagttaaagtgttcaagtctatg 678

                                                                       
Query: 485 aatacactgtgttctcctcttgcctctgtttgtgtgtgtgtgtgtgtgtgtgt------a 538
           |||||||||||||||||||||||||||||||||||||||||||||||||||||      |
Sbjct: 679 aatacactgtgttctcctcttgcctctgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgta 738

                                                                       
Query: 539 cgtgtgtgtgtgtgccctcaaatgccacgagcactaccatttcactgcctccgccatcgt 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cgtgtgtgtgtgtgccctcaaatgccacgagcactaccatttcactgcctccgccatcgt 798

                                                                       
Query: 599 ctttgtatacattggcatcttcagatcttctgttatgtcttggtatactaataactactt 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ctttgtatacattggcatcttcagatcttctgttatgtcttggtatactaataactactt 858

                                                       
Query: 659 acattttctgttaatggcacatgctacattgcactgaaattcct 702
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 acattttctgttaatggcacatgctacattgcactgaaattcct 902


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space:   757449
Effective search space used:   757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)