TTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAACCAATATAGCCATGAATATGCCATGAATTCACGACAATCCTCC
TACCTCAGTCTATGGCTGCAGTTCTCAACCTGTGAGTTGTGACCCCTCTG
GGGAATCAAAGGAACTTTTCACAAGGTCGCAAGATATCCTGCGTATCAGG
ATATTTACATTATGATTCATAATAGCAGCAAAATTAAGAGTCATGGAGTA
GGAACAAAAATAGTTTTATGGTTGGGGGGTGGTCAGCACAACATAAGGAA
CTGTATTAAGGGTCTCAGAATTAGGAAGGTTGAGAACCACTGGTCTAATG
GAGTCCTGAATTACAGACGGGAGGCACTATACCCAGCTAAGGTATTTTTT
AAAAAAAATATTATTAGCCATCAATTGATTTGAAAACCAAATGTATGATC
TACAGAGCTAGCAATTGTTCTTAAGAAATACTATTTTTCTAAACTTAGTT
TGAAATTACAGTAAAGGACTGGAGAGACAGAGAGCACAGTGGGTAAGAAC
ATTTATTGCTATTGCAGAGGGCCTGGGTTTAATTCCCAGCACCCATGTGG
TGGTTCACAACCACCTGTTTCTCCAGTTCCAGGAAATCTGACGCCCTCAT
CTGACCTCTGTGAGCACCAGACCCCCATGTGGTGCACATACAAACATATA
ACACAAGTTAATAAAT

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGGGCAAAATAAAGTCTCAGAT
CCCTCTTCTTAATCTGAGAACAAAAACTAGAGCCAAAGAGAGGGGGTGAC
TTGCCAAAGGGCATGAAGCAAGTCCTGGCAGTCAGTACAGCACATAAGTC
AGAAGTTTCTACACTCGGATCATAGCATCATCTAAGATGCACTGAGCGCT
GCCTGTAAACCAGATGCTCTTCTAGGTGGTTTTGATTGTTCTCACTCATT
TAACTTGCACCACTAACTACCCCAGCAGACCATTCGTAGTAACACCCGCA
GAGCCAAGGTTGCACAATTGACAAACAGCTAGAACTCTAGTAACTTCTAA
AGACAACTCAGAACAGCAGCAATAACCACACAACCCCTCAGCTACAACCC
CACACCCTCCAATAGAGTCTTCAAGCAGAGTCTACTCTCTAATGGTTCGT
TTGCTTTGAAATTGGGTAGGTTCATCTCTTCTCCCACCCGCAATCCTTCA
TCACTCTGGAAAAGCATTCCAAGAAGTGGCTCCTTCCAGTCCTCTGCTTG
GATGCTTGGGCTATGTTGCTGACTTCCCAATAAGCTATTCCTTGGCTTCT
ACATCATGGCCTCTGTTCGGTCTCTCATCTAAGGGGACTGGGATGGTCAC
GGAGAAAGAAGACAN

Query= MSMg01no233_e08.g1 MSMg01no233_e08.g1 CHROMAT_FILE:
MSMg01no233_e08.g1 PHD_FILE: MSMg01no233_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:57 2005
         (616 letters)



>mm_chr4_105886704_105887719
          Length = 1016

 Score = 1120 bits (579), Expect = 0.0
 Identities = 588/591 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgggcaaaataaagtctcagatccctcttcttaatctgagaacaaaaactagagccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgggcaaaataaagtctcagatccctcttcttaatctgagaacaaaaactagagccaa 260

                                                                       
Query: 61  agagagggggtgacttgccaaagggcatgaagcaagtcctggcagtcagtacagcacata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagggggtgacttgccaaagggcatgaagcaagtcctggcagtcagtacagcacata 320

                                                                       
Query: 121 agtcagaagtttctacactcggatcatagcatcatctaagatgcactgagcgctgcctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtcagaagtttctacactcggatcatagcatcatctaagatgcactgagcgctgcctgt 380

                                                                       
Query: 181 aaaccagatgctcttctaggtggttttgattgttctcactcatttaacttgcaccactaa 240
           |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 aaaccagatgctgttctaggtggttttaattgttctcactcatttaacttgcaccactaa 440

                                                                       
Query: 241 ctaccccagcagaccattcgtagtaacacccgcagagccaaggttgcacaattgacaaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaccccagcagaccattcgtagtaacacccgcagagccaaggttgcacaattgacaaac 500

                                                                       
Query: 301 agctagaactctagtaacttctaaagacaactcagaacagcagcaataaccacacaaccc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agctagaactctagtaacttctaaagacaactcagaacagcagcaataaccacacaaccc 560

                                                                       
Query: 361 ctcagctacaaccccacaccctccaatagagtcttcaagcagagtctactctctaatggt 420
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 ctcagctacaaccccacaccctccaatagagtcttcaagcagagtctactttctaatggt 620

                                                                       
Query: 421 tcgtttgctttgaaattgggtaggttcatctcttctcccacccgcaatccttcatcactc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcgtttgctttgaaattgggtaggttcatctcttctcccacccgcaatccttcatcactc 680

                                                                       
Query: 481 tggaaaagcattccaagaagtggctccttccagtcctctgcttggatgcttgggctatgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggaaaagcattccaagaagtggctccttccagtcctctgcttggatgcttgggctatgt 740

                                                              
Query: 541 tgctgacttcccaataagctattccttggcttctacatcatggcctctgtt 591
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgctgacttcccaataagctattccttggcttctacatcatggcctctgtt 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)