TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCAAAAGAAGAAATATCAATGGCTAATGAATAGCTTAAAGTGTATTT
TTTTATACAGACTGAGCAGGTTTCATTATTGTATTTAGGAACACAACACA
CATACACTCACTCAGATAAACATACATGCACACGCGCACGCACACACACA
CACACACACACAAACACTGCATCACATACACTCACTCAGATAAACACATA
TGCACATGCACACACACAAACACTGCAAATACACAATTAACAATTTTATG
AAAAAAAGAGACCATGGATTTTAAAAAAGATTAAGGAGAAATCTACAAAA
GAGTTTAGATAGAGGAATGGTAATGGGGGAATGATATCATTATATTATAA
TCTTAAAAAAGAAAATAAATAGTTTTTTAAATGGGTTTAATATTAGTAGG
TGTCAGAGAATGCAAATCAAAACTACTTTGAGATTCATTTTCACTCAAGT
CACAATGGATATGATCAAGAAATCAAATGATCATAGATGTGAGAAAGAAT
AAACTTTATTCACTTTTACTGTAAATGCCAAGTGATACAGCCACTATCAA
AATTGGTTATAGATTCCTTATGAAGTTAGGAACAGAATGACCCAGTTACT
CCATTTCTTCGCAGAAAGTCAGAGGGTTTTATATCCTGCCAACATATTTG
CTCATTAACGTTTATTGTCAGTT

TCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCCACAGGCTCAGATGTTCTCTACAGA
GCTGGGGACTTGGTGTCTGGATAGGCTGGAAAAATCTCATTGTATCCTGT
TAAGAAAAAGCTGTGCTCCACAATCCAGCCCCATTTCCTTCCCTCTTTGA
ACATATAGAGAGATAGGTTTTAGTGATTTTGCAAAGGTTCTGTTAACATT
AAATGGATACACATGGCCCAGTAGAACTTAGATTCTTGCTGTGGAAAACT
AATTAGGGAGCTGTTGCTTTAGAGATATTGTCAGCAAGAGCTTTTGTCTT
AAGGGTTTGTAAATATTTATATTTTCAAACTACTATGAGAAGAACAACAG
CTATTCCACATGAATGGGTTGCGTTAAATGTACCCGGAGCCTGTAATTCA
AGCTGTCAAATGTGAGGAAATACCAGACTTAAGGCTGCCATTCCAATCCA
CTCAGAATAAATAAGGACTTCAGGCAGAGCTCTTTAACAGAATGGCTCAC
AGACATATGGAAGACGTTACTAGGGAAGATGACTGAAGAAAAGGAAAAAC
ACATTAAATGAATTCAAAATATACCTAGTCTTTCCCCCTGGGAGGGAAGG
AACTGAGGCTTGAGGGAGAAGATTGTTGGCCTAGGAATAGGGAAATGGAT
TAACATTAAACCAAGAATGAGGGGT

Query= MSMg01no235_k11.g1 MSMg01no235_k11.g1 CHROMAT_FILE:
MSMg01no235_k11.g1 PHD_FILE: MSMg01no235_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:02 2005
         (651 letters)



>mm_chr4_64383909_64384958
          Length = 1050

 Score = 1243 bits (643), Expect = 0.0
 Identities = 649/651 (99%), Gaps = 1/651 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccacaggctcagatgttctctacagagctggggacttggtgtctggataggctggaaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccacaggctcagatgttctctacagagctggggacttggtgtctggataggctggaaaaa 260

                                                                       
Query: 61  tctcattgtatcctgttaagaaaaagctgtgctccacaatccagccccatttccttccct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcattgtatcctgttaagaaaaagctgtgctccacaatccagccccatttccttccct 320

                                                                       
Query: 121 ctttgaacatatagagagataggttttagtgattttgcaaaggttctgttaacattaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgaacatatagagagataggttttagtgattttgcaaaggttctgttaacattaaat 380

                                                                       
Query: 181 ggatacacatggcccagtagaacttagattcttgctgtggaaaactaattagggagctgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggatacacatggcccagtagaacttagattcttgctgtggaaaactaattagggagctgt 440

                                                                       
Query: 241 tgctttagagatattgtcagcaagagcttttgtcttaagggtttgtaaatatttatattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctttagagatattgtcagcaagagcttttgtcttaagggtttgtaaatatttatattt 500

                                                                       
Query: 301 tcaaactactatgagaagaacaacagctattccacatgaatgggttgcgttaaatgtacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaaactactatgagaagaacaacagctattccacatgaatgggttgcgttaaatgtacc 560

                                                                       
Query: 361 cggagcctgtaattcaagctgtcaaatgtgaggaaataccagacttaaggctgccattcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cggagcctgtaattcaagctgtcaaatgtgaggaaataccagacttaaggctgccattcc 620

                                                                       
Query: 421 aatccactcagaataaataaggacttcaggcagagctctttaacagaatggctcacagac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatccactcagaataaataaggacttcaggcagagctctttaacagaatggctcacagac 680

                                                                       
Query: 481 atatggaagacgttactagggaagatgactgaagaaaaggaaaaacacattaaatgaatt 540
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 681 atatggaagacgttactagggaagatgactgaagaaaaggaaaa-cacattaaataaatt 739

                                                                       
Query: 541 caaaatatacctagtctttccccctgggagggaaggaactgaggcttgagggagaagatt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caaaatatacctagtctttccccctgggagggaaggaactgaggcttgagggagaagatt 799

                                                              
Query: 601 gttggcctaggaatagggaaatggattaacattaaaccaagaatgaggggt 651
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gttggcctaggaatagggaaatggattaacattaaaccaagaatgaggggt 850


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1050
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1040
Effective search space:   666640
Effective search space used:   666640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)