Query= MSMg01no236_g05.b1 MSMg01no236_g05.b1 CHROMAT_FILE:
MSMg01no236_g05.b1 PHD_FILE: MSMg01no236_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:56 2005
(319 letters)
>mm_chr4_18186895_18187613
Length = 719
Score = 559 bits (289), Expect = e-164
Identities = 307/313 (98%), Gaps = 2/313 (0%)
Strand = Plus / Minus
Query: 5 gaattccaaagcttaccacctaaagctgctcgctgtgcaatattgaccattctattccag 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattccaaagcttagcacctaaagctgctcgctgtgcaatattgaccattctattccag 457
Query: 65 cttcttattat-actcaatcatataatattatcatgcctagattttcagttctccctctc 123
||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cttcttacaataac-aaatcatataatattatcatgcctagattttcagttctccctctc 398
Query: 124 ccaataaagcatgtctctcttgttagttcatttaattaagtgtagggctatcagttctta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ccaataaagcatgtctctcttgttagttcatttaattaagtgtagggctatcagttctta 338
Query: 184 cagctcaccagaataagccttgtctgaggttctttcatgtctactgtgatagctttttct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cagctcaccagaataagccttgtctgaggttctttcatgtctactgtgatagctttttct 278
Query: 244 atttagccttttaaatatgtcttttcctctttgcttaccttctttttctactgctgtttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atttagccttttaaatatgtcttttcctctttgcttaccttctttttctactgctgtttt 218
Query: 304 caaaagcaactta 316
|||||||||||||
Sbjct: 217 caaaagcaactta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_g05.g1 MSMg01no236_g05.g1 CHROMAT_FILE:
MSMg01no236_g05.g1 PHD_FILE: MSMg01no236_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:56 2005
(234 letters)
>mm_chr4_18098088_18098721
Length = 634
Score = 435 bits (225), Expect = e-126
Identities = 231/233 (99%)
Strand = Plus / Plus
Query: 1 gttagaagactgggcagataccgagttctttctcttctccttgaaatgtttaatttgaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttagaagactgggcagataccgagttctttctcttctccttgaaatgtttaatttgacg 260
Query: 61 tgcaaatggaatatactctagttataaaacatttaggagctcaataaatgttttctgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaaatggaatatactctagttataaaacatttaggagctcaataaatgttttctgaat 320
Query: 121 gtatttatggaatgaacatgaaagatgcagaattcattactttgtgattatacatttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatttatggaatgaacatgaaagatgcagaattcattactttgtgattatacatttagc 380
Query: 181 agtcaatatatgtttactaagtgcttcccaatcttacttttcattttagagta 233
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcaatatatgtttacaaagtgcttcccaatcttacttttcattttagagta 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
