CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATAGCCATATCAAGCATGGAATAATTTGGAATAAAAAAATTTATGT
GCAAGTTGGAGAGATAGATTATACAATTACATGCTAAAGTTGGAAATTAT
TTGTCTCTAACCAACAATACAGGTACTTTGAATTTTATTCCTTGATTTTT
CAAATTTTTAATATTTTCTCTAATTTTGACAGTTATAACAATCTTTACAA
GTTACTTCTGAGACAGAATTCTCAAGGCATATCTAAGTTAGTGTTTCCAC
TGCTGCCTTTGAGAGACCCTGTATTTGGGGTAACAATTACAAAGCCAGTC
TTTGGTTCTCAATTATTTTTTTCTGTAAACTTCATTGGGTCTTTAAGTCC
AGACATGGTCTAAGAGTATTGAGTTAGTCTGGAGCATAATTTTCCTATAT
GTCCATAATGATTCTAAGGGTTTGTGTTTACAAAAGCACATGTGATCTGG
TCAATAATCCATGGAAATAGCCCAGTGCAGGTCACTGACGGGTGTTTCAG
ACTGAAATGGCAGTGGAGGAAGGCCGCATGCTGGTGGCTAGAATGGTTGT
CACAGTTAAATCTGAGTGACAAGATGTCAGACCACTCTGTGATCACAGAG
GAGTTCTCTCGCACGGTTTTCTTTTTAGAAACTCTATTATGAGAAGTAGG
GGAGCGCTTCTTTAAGCAAATGTTACAG

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTCACTAAACTCATCTGGATCTGG
GCTTTGGGGGGGTTGGGAGACTTTCCAACTACTTCATCTATTTCTAAAAG
GGTTTGGAAACTGTTTTGATGGTTTATTTGATCCTAATGTAACTTTGGTA
CTTTTTAATCTGTCTAGAAGACTGTACATTTCATCTAGATTTCTAAGTTT
TGTTGAGTATAGGCTTTTGTAGTATTAATAATATATTAAATTTCCCCAGT
TTCTGTTGTTATATCTCCTTTTTCATCTCAGATTTTGTTAATTTGGATAC
TGTCTCTGTGCCTTTTGTTTAGCCTCGCCTCCCGCCTTATCTATCTTGAT
GATTTTCTCAAAGAACCAGCTCCTGGTTTAGATGATTCTTTGTAGAGTTC
TTTTTGTTTCCACTTGGTTGATTTCAGCCCTGAGTTTGATTATTTCCTGC
CATCTACTCCTCTTGTGTAAATTTGCCTTTTTTTTTTTTCTTCACTTTTT
CTTATTGCTCCAGAACTTTCAGGGGTGCTGGTAACCTACTATTGAATGCT
CTTTCTAGTTTCCCTTTGGAGGCCCTCATAGAAATTGAGTTTTTTTTTTT
TCACTGCTTTTCCTGCCCTCCCATTATTTTTATCTATTTTGCCCCTCCCC
CCCTTCGTTTTTTCTTTAATTGTCTTCTACCCCCCCG

Query= MSMg01no236_p16.b1 MSMg01no236_p16.b1 CHROMAT_FILE:
MSMg01no236_p16.b1 PHD_FILE: MSMg01no236_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:41 2005
         (653 letters)



>mm_chr4_82547954_82549001
          Length = 1048

 Score = 1178 bits (609), Expect = 0.0
 Identities = 640/653 (98%), Gaps = 5/653 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggaataatttggaataaaaaaatttatgtgcaagttggagagatagattatacaattaca 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 848 ggaataatttggaataaaaaaatttatgtgcaagttggagagatagattatagaattaca 789

                                                                       
Query: 61  tgctaaagttggaaattatttgtctctaaccaacaatacaggtactttgaattttattcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tgctaaagttggaaattatttgtctctaaccaacaatacaggtactttgaattttattcc 729

                                                                       
Query: 121 ttgatttttcaaatttttaatattttctctaattttgacagttataacaatctttacaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ttgatttttcaaatttttaatattttctctaattttgacagttataacaatctttacaag 669

                                                                       
Query: 181 ttacttctgagacagaattctcaaggcatatctaagttagtgtttccactgctgcctttg 240
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 668 ttacttctgagacagaattctcaaggcatatctgagttagtgtttccactgctgcctttg 609

                                                                       
Query: 241 agagaccctgtatttggggtaacaattacaaagccagtctttggttctcaattatttttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 agagaccctgtatttggggtaacaattacaaagccagtctttggttctcaattatttttt 549

                                                                       
Query: 301 tctgtaaacttcattgggtctttaagtccagacatggtctaagagtattgagttagtctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tctgtaaacttcattgggtctttaagtccagacatggtctaagagtattgagttagtctg 489

                                                                       
Query: 361 gagcataattttcctatatgtccataatgattctaagggtttgtgtttacaaaagcacat 420
           ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 488 gagcataatttccctatatgtccataatggttctaaggctttgtgttcacaaaagcacat 429

                                                                       
Query: 421 gtgatctggtcaataatccatggaaatagcccagtgcaggtcactgacgggtgtttcaga 480
           |||||||||||||||||||||||||||||||||||||||||||     ||||||||||||
Sbjct: 428 gtgatctggtcaataatccatggaaatagcccagtgcaggtca-----gggtgtttcaga 374

                                                                       
Query: 481 ctgaaatggcagtggaggaaggccgcatgctggtggctagaatggttgtcacagttaaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctgaaatggcagtggaggaaggccgcatgctggtggctagaatggttgtcacagttaaat 314

                                                                       
Query: 541 ctgagtgacaagatgtcagaccactctgtgatcacagaggagttctctcgcacggttttc 600
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 313 ctgagtgacaagatgtcagaccactctgtgatcacagaggagttctctcgcatggttttc 254

                                                                
Query: 601 tttttagaaactctattatgagaagtaggggagcgcttctttaagcaaatgtt 653
           ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 253 tttttagaaactctattatgagaagtaggggagtgcttctttaagcaaatgtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1048
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1038
Effective search space:   667434
Effective search space used:   667434
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)