Query= MSMg01no237_c16.b1 MSMg01no237_c16.b1 CHROMAT_FILE:
MSMg01no237_c16.b1 PHD_FILE: MSMg01no237_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:55 2005
(329 letters)
>mm_chr4_77464342_77465070
Length = 729
Score = 518 bits (268), Expect = e-151
Identities = 310/326 (95%), Gaps = 4/326 (1%)
Strand = Plus / Plus
Query: 6 aattccatgtctttcccttgagcaaatgaggttgaatatagacgtcaaatccaaggaaaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattccatgtctttcccttgagcaaatgaggttgaatatagacgtcaaatccaaggaaaa 265
Query: 66 catataactgtgccccattactaatatattcacattgagaatgagttcctctaatacaat 125
||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 266 catgtaactgtgtatcattactaatatattcacattgagaatgagatcctctaatacaat 325
Query: 126 aca----tttttttttttttgagacagggtttctctgtatagccctggctgtcctggaac 181
||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 326 acatttttttttttttttttgagacacggtttctctgtatagccctggctgtcttggaac 385
Query: 182 tcactttgtagaccaggctgacctcgaactcagaaatccacctgcctctgcctcctgagt 241
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tcactttgtagacaaggctgacctcgaactcagaaatccacctgcctctgcctcctgagt 445
Query: 242 gctgggattaaaggcatgtacccccacgccctgcttttctcacattttaattctaaatcc 301
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 446 gctgggattaaaggcatgtacccccatgccctgcttttcttacattttaattctaaatcc 505
Query: 302 aacaaaacactctaaattttttatga 327
|||||||| |||||| ||||||||||
Sbjct: 506 aacaaaaccctctaatttttttatga 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_c16.g1 MSMg01no237_c16.g1 CHROMAT_FILE:
MSMg01no237_c16.g1 PHD_FILE: MSMg01no237_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:55 2005
(298 letters)
>mm_chr4_77528218_77528915
Length = 698
Score = 545 bits (282), Expect = e-160
Identities = 294/298 (98%)
Strand = Plus / Minus
Query: 1 attcctggggagactggaacaagaggttccttggggttccctgccacccaatctaaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 attcctggggagactggaacaagaggttccttggggttccctgccacccaatctaaccta 596
Query: 61 attggtgagctccaggccaatgagaacccctgtgtgagggaaggtggttagcctttgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 attggtgagctccaggccaatgagaacccctgtgtgagggaaggtggttagcctttgaga 536
Query: 121 agaggacatttaggttgacttctttgttttccacacatgtgtctccaccatcttcacacc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 535 agaggacatttaggttgacttctttgttttccacacatgtgtctccactatcttcacacc 476
Query: 181 tgtagagatacaaaatctcacacatggaagtattaatatagacttgtatacatccataca 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 475 tgtagagatacaaaatctcacacatggaagtattaatatagacttgtatatatccataca 416
Query: 241 aattagacctgatatttccatagactattctgaatatagcactgtttattctactgct 298
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 415 aattagacctgatatttccatagactgttctgaatatagcactgtttagtctactgct 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
