TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCAGCAAGTGTCCCAACCACTGAGGCTGACCTATCATCCCCACAT
GCACTTGCACACACATACAGGCGCAGGAACATGCATGCACATACCCAAAA
TAGCTCCATTCAACATGATAAACAGAACACAAATAGTTCGTCTTACCCTC
TCTTAACAGATTCCAAAAACTGAGCATTTGTTGGGTCATTGTAAGGCCTC
AATTCTCCATCGTCTAAACTGAAACCATTGCGCCACAGCTTCAGTAAAAC
CTGAACCTTTGGAGATTTAAAATAAAAAAAAAAAGAAAAGAAATTCATCT
CTAAATAATTTTACGTTTCAATGAGGTATCTCCCAAATTACTATCTGATA
AATTTATCTTAAAATATAAAGATATTTGCTTTACTTGAAGCTAACCTTGT
GTCTTCATGTGTTTACTTAGTGGGTTTATTTTTAGCTTAAAGCTCTGATA
ATAGCTGCAAATATCGAAGGCCCACAGATGGAGCCTGGCTTCTGTGCATC
ACTCAGGACACAAACAGTGAGAAGTCAGCCTCTGCTTGGCACCTGTGACT
TAGTCCCCTCATCCAAACCCAAACTCTCCTTAGCTCCACAGCTTAAACAG
CCAGGCCCAAGGCGCAAGGCAGAACTTTCTAAAAAGCTAAAAAAAGGAAT
CATTTTTAACCATTCCAA

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTTTAGGAAAGATTCCTGTTATTAA
TATGCTTCTCCTGTTATTATTAAACATATATAATAATCACTAAGTATTAG
ACCATCCTTTTTTAGCAGATCTCTGCAGATCTACAAAATATAGTGTATTG
TAGTGATGCTATAAGAATAAATAGATGACTTCTTGAGTCTTAATGATGAT
GCTATAAGAACTTCTAAAATTATATCGGTGATTATTAAGCTCTTTTATAG
TGGGACTGCTATTAGAGCCTTTTCTTATAGTCAAAACTGCAATGAGAACT
CTGTCAGTCTCCCATGTGTCACCAGTTAATTGCCTGTTAGATAGTAACCA
GACTTTTTCCTACTCAAAGCACATTCCAAGAGGTTGTAAAACAATTAACT
AAAGGTCATAAAAGGGAACTAATGATTTATTATAGGTGTAGGACAGAAGG
ATCTTGACTGGGTTTATCTATACAAAACTTCACTAATAACTTAGTTATGG
ATTCTCACTTTCAATGAACCTGTGGAGCTCTGATGTTTAGCCAGATGATT
ACTCCTAATGGATATGCATGTAAACATTCTCTCTTGTAAACTTCTATTCC
ATTTTATGGTTTAATATTCTGTGTGATTTTGTCGTGAACTTTTTAAAATG
TGATCATG

Query= MSMg01no261_b16.b1 MSMg01no261_b16.b1 CHROMAT_FILE:
MSMg01no261_b16.b1 PHD_FILE: MSMg01no261_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:25 2005
         (506 letters)



>mm_chr4_6131260_6132167
          Length = 908

 Score =  891 bits (461), Expect = 0.0
 Identities = 500/519 (96%), Gaps = 13/519 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccactgaggctgacctatcatccccacatgcacttgcacacacatacaggcgcaggaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ccactgaggctgacctatcatccccacatgcacttgcacacacatacaggcgcaggaaca 627

                                                                       
Query: 61  tgcatgcacatacccaaaatagctccattcaacatgataaacagaacacaaatagttcgt 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgcatgcacatacccaaaacagctccattcaacatgataaacagaacacaaatagttcgt 567

                                                                       
Query: 121 cttaccctctcttaacagattccaaaaactgagcatttgttgggtcattgtaaggcctca 180
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 566 cttaccctctcttaacagattccaaaaactgagcatttgttgggtcactgtaaggcctca 507

                                                                       
Query: 181 attctccatcgtctaaactgaaaccattgcgccacagcttcagtaaaacctgaacctttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 attctccatcgtctaaactgaaaccattgcgccacagcttcagtaaaacctgaacctttg 447

                                                                       
Query: 241 gagatttaaaataaaaaaaaa--aagaaaagaaattcatctctaaataattttacgtttc 298
           |||||| |||| |||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 446 gagattaaaaaaaaaaaaaaagaaagaaaagaaattcatctctaaataattttacgtttc 387

                                                                       
Query: 299 aatgaggtatctcccaaattactatctgataaatttatcttaaaatataaagatatttgc 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aatgaggtatctcccaaattactatctgataaatttatcttaaaatataaagatatttgc 327

                                                                       
Query: 359 tttacttgaagctaaccttgtgtcttcatgtgtttacttagtgggtttatttttagctta 418
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tttactcgaagctaaccttgtgtcttcatgtgtttacttagtgggtttatttttagctta 267

                                                                       
Query: 419 aagctctgataatagctgcaaatatcgaaggcccacagatggagcctggcttctgtgcat 478
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 266 aagctctgataatagctgcaaatatcgaaggcccacagatggagcctggcctctgtgcat 207

                                                  
Query: 479 cactca----g-ga------cacaaacagtgagaagtca 506
           ||||||    | ||      |||||||||||||||||||
Sbjct: 206 cactcacacagtgagaaacacacaaacagtgagaagtca 168


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 908
Length adjustment: 10
Effective length of query: 496
Effective length of database: 898
Effective search space:   445408
Effective search space used:   445408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)