Query= MSMg01no266_m08.b1 MSMg01no266_m08.b1 CHROMAT_FILE:
MSMg01no266_m08.b1 PHD_FILE: MSMg01no266_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:39 2005
(293 letters)
>mm_chr4_135135458_135136147
Length = 690
Score = 460 bits (238), Expect = e-134
Identities = 278/292 (95%), Gaps = 3/292 (1%)
Strand = Plus / Minus
Query: 1 acaaaattgattttgtagaagttcataaaagtaaaaaaaaacatttcctggaggcccatt 60
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 489 acaaaattgattttgtagaagttcataaaagt--aaaaaaacgtttcctggagggacatt 432
Query: 61 atttccccgcccccacccccccagcgtgtggcagaggagacagcctgggactccggaact 120
|||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 431 atttacccgccccca-ccccccagcgtgtggcagaggacacagcctgggactccggaact 373
Query: 121 cctgctgggaccagaccttggccacttcctttctctgcagagggcttgggtgtgccccaa 180
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||
Sbjct: 372 cctgctgggaccagaccttggccacttcctttcactgcagagggtttgggtgtgccgcaa 313
Query: 181 cgctgtttgcagtgatgatattggaattaactggttttcctgagttcacttttagttggg 240
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggctgtttgcagtgatggtgttggaattaactggttttcctgagttcacttttagttggg 253
Query: 241 agtgggcagtatctttcacgggcacagactagtgatggacccagagatagcc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agtgggcagtatctttcacgggcacagactagtgatggacccagagatagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 690
Length adjustment: 9
Effective length of query: 284
Effective length of database: 681
Effective search space: 193404
Effective search space used: 193404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no266_m08.g1 MSMg01no266_m08.g1 CHROMAT_FILE:
MSMg01no266_m08.g1 PHD_FILE: MSMg01no266_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:39 2005
(187 letters)
>mm_chr4_135003743_135004329
Length = 587
Score = 356 bits (184), Expect = e-103
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 1 atgacctcctctggaagaacagccagtgttcttaaccactgagccatctctccagccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgacctcctctggaagaacagccagtgttcttaaccactgagccatctctccagccctt 260
Query: 61 gttttgagatttaatatacccacaacagaacactgggcctgctgtgccaggcacaatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttttgagatttaatatacccacaacagaacactgggcctgctgtgccaggcacaatctt 320
Query: 121 tgtccacataaagctgaatttattctacaatggatgatggtggtggtggtgatgaagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtccacataaagctgaatttattctacaatggatgatggtggtggtggtgatgaagagg 380
Query: 181 aggg 184
||||
Sbjct: 381 aggg 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
