Query= MSMg01no271_d04.b1 MSMg01no271_d04.b1 CHROMAT_FILE:
MSMg01no271_d04.b1 PHD_FILE: MSMg01no271_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:01 2005
(364 letters)
>mm_chr4_102816073_102816837
Length = 765
Score = 658 bits (340), Expect = 0.0
Identities = 355/360 (98%), Gaps = 1/360 (0%)
Strand = Plus / Plus
Query: 4 ggaattctggaggtgtgtgccataaaatatccagtctcttttaaaaacatgtttctctgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctggaggtgtgtgccataaaatatccagtctcttttaaaaacatgtttctctgt 263
Query: 64 attttaaatgtcctaaacttggtagtttctagcctttataacttcaattaccaatttgaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attttaaatgtcctaaacttggtagtttctagcctttataacttcaattaccaatttgaa 323
Query: 124 agccaagtgttaaacaactggttatttgcttctaaaactcaatactactaaaaaggaatg 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agccaaatgttaaacaactggttatttgcttctaaaactcaatactactaaaaaggaatg 383
Query: 184 ttttgttgtgtgttttaaaataatttgggaatactacttgtatatttaaatttcaaaagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttgttgtgtgttttaaaataatttgggaatactacttgtatatttaaatttcaaaagt 443
Query: 244 ttttttttt-aaccattaacatcaaagtctaaggccagtcatacatctaataacataaaa 302
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttttttttaaccatttacatcaaagtctaaggccagtcatacatctaataacataaaa 503
Query: 303 taaatgaggattccgtggggttttttttcttggttttggtttttgtttttcttgtttttt 362
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaatgaggattctgtgggggtttttttcttggttttggtttttgtttttcttgtttttt 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 765
Length adjustment: 9
Effective length of query: 355
Effective length of database: 756
Effective search space: 268380
Effective search space used: 268380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_d04.g1 MSMg01no271_d04.g1 CHROMAT_FILE:
MSMg01no271_d04.g1 PHD_FILE: MSMg01no271_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:01 2005
(288 letters)
>mm_chr4_102962468_102963155
Length = 688
Score = 499 bits (258), Expect = e-146
Identities = 282/292 (96%), Gaps = 4/292 (1%)
Strand = Plus / Minus
Query: 1 catactttttccagcttttaaaatgggccactcagaaagattaagcaacaagcccaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 catactttttccagcttttaaaatgggccactcagaaagattaagcaacaagcccaccat 292
Query: 61 cacacagctgccatttctaccacctcctccttccaactcctcccatgccccttaactccc 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cacacagctgtcatttctaccacctcctccttccaactcctcccatgccccttaactccc 232
Query: 121 catcaaattcttaacttcttattgctgttaagtgtgtacatgtgcatgcggg----gtgt 176
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 231 catcaaattcttaacttcttattgctgttaagtgtgtacatgtgcatgcggggtgtgtgt 172
Query: 177 gtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagagagagaatgc 236
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagagaatgc 112
Query: 237 ttgcatgcatgtatttgtgtgtgtgagtgcttgtatgcatgcatgtgtgtgc 288
|||||||||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 111 ttgcatgcatgtatgtgtgtgtgtgagtgcttgcatgcatgcgtgtgtgtgc 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
