Query= MSMg01no272_g15.b1 MSMg01no272_g15.b1 CHROMAT_FILE:
MSMg01no272_g15.b1 PHD_FILE: MSMg01no272_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:34 2005
(323 letters)
>mm_chr4_3810366_3811088
Length = 723
Score = 601 bits (311), Expect = e-176
Identities = 317/319 (99%)
Strand = Plus / Plus
Query: 5 gaattcctgatatgctcctgtattgggcagactccaagcagccacaggtaggctaaaaga 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgatatgctcctgtgttgggcagactccaagcagccacaggtaggctaaaaga 264
Query: 65 actgtatgagtaacaacccatcacccaagggttctggctaacgcaaacatgaccctcaac 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 actgtatgagtaacaacccatcactcaagggttctggctaacgcaaacatgaccctcaac 324
Query: 125 acttgttagagcagtggttctcaaccttcctaatgccaggactatttatggtagtgatcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acttgttagagcagtggttctcaaccttcctaatgccaggactatttatggtagtgatcc 384
Query: 185 tcaaccataaaatcattttgttgctacctcataagtgtgacttcactaccgggatgagtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaaccataaaatcattttgttgctacctcataagtgtgacttcactaccgggatgagtt 444
Query: 245 ctagtgtaaataactgatgtgaccctctcgggtctcgacttacaggttgagaatcactgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctagtgtaaataactgatgtgaccctctcgggtctcgacttacaggttgagaatcactgc 504
Query: 305 tttagagaaaacaatcaaa 323
|||||||||||||||||||
Sbjct: 505 tttagagaaaacaatcaaa 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_g15.g1 MSMg01no272_g15.g1 CHROMAT_FILE:
MSMg01no272_g15.g1 PHD_FILE: MSMg01no272_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:34 2005
(513 letters)
>mm_chr4_3942943_3943855
Length = 913
Score = 948 bits (490), Expect = 0.0
Identities = 502/506 (99%)
Strand = Plus / Minus
Query: 8 aattcagtatcagcatccagtattttccttcagagaaggggaactgaccaaactctctct 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 aattcagtatcagcatccagtattttccttcagagaaggggaactgaccaaactctctct 654
Query: 68 tgctttaaaggtgtttgccagaacatgtctcaaaacctggaatcagtgaagaacttgctt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tgctttaaaggtgtttgccagaacatgtctcaaaacctggaatcagtgaagaacttgctt 594
Query: 128 gttttcttgggaaaatcactgttgagtgttttggaggccctactttttcatgtcatctca 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gttttcttgggaaaatcactgttgagtgttttggaggccctactttttcatgtcatctca 534
Query: 188 aaaccacggaagaacgttgctggtgagatagtgctcataacaggtgctgggagtggactc 247
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aaaccacggaagaacgttgccggtgagatagtgctcataacaggtgctgggagtggacta 474
Query: 248 ggaaggctcttagcattgcagtttgcccgcctgggagcagtgcttgttctctgggatgtg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ggaaggctcttagcattgcagtttgcccgcctgggagcagtgcttgttctctgggatgtg 414
Query: 308 aacaaggaggcaaatgatgagactcatcagttagctcgggaagcaggagctgccagagta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aacaaggaggcaaatgatgagactcatcagttagctcgggaagcaggagctgccagagta 354
Query: 368 catgcctacacctgtgactgcagccggagggaagaagtgtacagagtggctgaccaggta 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 catgcctacacctgtgactgcagccggagggaagaagtgtacagagtggctgaccaggta 294
Query: 428 catcgagggagtctcattgggttttgtgggttgtgagaatcctatgtaattactttgcca 487
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 293 catcgagggagtctcattgggttttgtgggttgtgagaatcctatgcaattactttggca 234
Query: 488 tgcacccgttttattcattgacctgt 513
||||||||||||||||||||||||||
Sbjct: 233 tgcacccgttttattcattgacctgt 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
