Query= MSMg01no272_p02.b1 MSMg01no272_p02.b1 CHROMAT_FILE:
MSMg01no272_p02.b1 PHD_FILE: MSMg01no272_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:13 2005
(316 letters)
>mm_chr4_5574742_5575457
Length = 716
Score = 518 bits (268), Expect = e-151
Identities = 301/312 (96%)
Strand = Plus / Plus
Query: 5 gaattcccaaacctgttcatgaccatgaaagtactgtgtgatggctgcggagtgtctctt 64
|||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattctcaaacctgttgatgaccatgaaagtactgcgtgatggctgcggagtgtctctt 264
Query: 65 ctccttgtccacagcactgatggcagcaataagatgagaatcaacctttcttctccacag 124
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 ctccttgtccacagcagtgatggcagcaataagatgagaatcaacctttctactccacag 324
Query: 125 tcctttcttatcttatttgtagacaacttgggcgggtttcttaatgattattttgcaaag 184
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 325 tcctttcttatcttatttgtagacagcttgggtgggtttcttaatgattattttgcaaag 384
Query: 185 tgatattaataaacatgtaccacgcattccttattttgacacctttggtttctccatgtg 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgatattaataaacatgcaccacgcattccttattttgacacctttggtttctccatgtg 444
Query: 245 tatgatgggggactgggcagaattttaatctttttcatatgatgaagttgtcacaatagg 304
||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 445 tatgatgggggactgggtagaattttaatctttttcatgtgataaagttgtcacaatagg 504
Query: 305 agagactacata 316
||||||||||||
Sbjct: 505 agagactacata 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_p02.g1 MSMg01no272_p02.g1 CHROMAT_FILE:
MSMg01no272_p02.g1 PHD_FILE: MSMg01no272_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:13 2005
(288 letters)
>mm_chr4_5734004_5734691
Length = 688
Score = 553 bits (286), Expect = e-162
Identities = 286/286 (100%)
Strand = Plus / Minus
Query: 2 agagaacagagggtgagcctgtgggtaggtcagtgtgcacagtggaagcatgcatgagtg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agagaacagagggtgagcctgtgggtaggtcagtgtgcacagtggaagcatgcatgagtg 428
Query: 62 gcttctgagtcaggcgtgttgctgctaatctgctgggagatcctcaatggttaacatcta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gcttctgagtcaggcgtgttgctgctaatctgctgggagatcctcaatggttaacatcta 368
Query: 122 gtagctcacttggaagccattccacagacccattcttctccaagactaggaatcatagag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtagctcacttggaagccattccacagacccattcttctccaagactaggaatcatagag 308
Query: 182 agatcccagatcttctccttccagtccatgccaggtggtctgctaggcatgggtcatacc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agatcccagatcttctccttccagtccatgccaggtggtctgctaggcatgggtcatacc 248
Query: 242 atagtgacagtgcatatcttcagggagggaacctttgggaaactga 287
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atagtgacagtgcatatcttcagggagggaacctttgggaaactga 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
