Query= MSMg01no273_e23.b1 MSMg01no273_e23.b1 CHROMAT_FILE:
MSMg01no273_e23.b1 PHD_FILE: MSMg01no273_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:39 2005
(375 letters)
>mm_chr4_19564065_19564839
Length = 775
Score = 634 bits (328), Expect = 0.0
Identities = 349/356 (98%)
Strand = Plus / Minus
Query: 20 tacaatgacaccctgccctcctccccgacatggcttctttctaaccatttatgagccttc 79
|||||||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 775 tacaatgacagcctgccttcctccccgacatggcttctttctagccattcatgagccttc 716
Query: 80 atcaatttcatcacaccattcctctctgtctcctttactggaatgtgtgctgcatgagag 139
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 715 atcagtttcatcacaccattcctctctgtctcctttcctggaatgtgtgctgcatgagag 656
Query: 140 catggattattggtttacttcacctctgtccagtacctagaagagtgcttttagtataac 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 catggattattggtttacttcacctctgtccagtacctagaagagtgcttttagtataac 596
Query: 200 agttattcaggaaatacttgaatatgtgactgtaacatgtctgcctttctggagtcattt 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agttattcaggaaatacttgaatatgtgactgtaacatgtctgcctttctggagtcattt 536
Query: 260 gcagaatatttttaaaaacaataacatcatttttttatggtgaaatggagaatttttcgt 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gcagaatatttttaaaaacaataacatcatttttttatggtgaaatggagaatttttcgt 476
Query: 320 gacctttcactgtcttccaatgcaatgactataactttcttaatactgaaatatgt 375
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 475 gacctttcactgtcttccaatgcaatgactataactttcttaatacttaaatatgt 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_e23.g1 MSMg01no273_e23.g1 CHROMAT_FILE:
MSMg01no273_e23.g1 PHD_FILE: MSMg01no273_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:39 2005
(262 letters)
>mm_chr4_19469413_19470071
Length = 659
Score = 455 bits (235), Expect = e-132
Identities = 254/262 (96%), Gaps = 3/262 (1%)
Strand = Plus / Plus
Query: 1 attctagtctcaataatttgagccattccacggcatgaaaacataggcaggcaaaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctagtctcaataatttgagccattccacggcatgaaaacataggcaggcaaaaagaa 260
Query: 61 gaagtgtttaactacctgggagcctaacaggaaaaagtaaaacattaggcttcacaaaaa 120
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 g---tgtttaactacctgggagcctaacagaaaaaagtaaaacattaggcttcacaaaaa 317
Query: 121 cctagacaaaatacaatctctataaaatgtattcaactctgaggaagtctgagcatgaat 180
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 318 cctagacaaaatacaatctctataaaatgtattcgacactgaggaagtctgagcatgaat 377
Query: 181 ggtacacagaagggcattagtaaatcaaaggtaatttccttaggaagnttcccagtgata 240
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 378 ggtacacagaagggcattagtaaatcaaaggtaatttccttaggtagtttcccagtgata 437
Query: 241 tagcatgtccttactctgagac 262
||||||||||||||||||||||
Sbjct: 438 tagcatgtccttactctgagac 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 659
Length adjustment: 9
Effective length of query: 253
Effective length of database: 650
Effective search space: 164450
Effective search space used: 164450
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
