Query= MSMg01no275_c21.b1 MSMg01no275_c21.b1 CHROMAT_FILE:
MSMg01no275_c21.b1 PHD_FILE: MSMg01no275_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:52 2005
(515 letters)
>mm_chr4_31170489_31171403
Length = 915
Score = 930 bits (481), Expect = 0.0
Identities = 511/531 (96%), Gaps = 16/531 (3%)
Strand = Plus / Minus
Query: 1 tagctatgaatattcaacctgacttgtcaagagccaatac----------------agcg 44
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 771 tagctatgaatattcaacctgacttgtcaagagccaatacaggcctgtaaaggctgagcg 712
Query: 45 attatttgtttatcatattatttgttatgctttcctgctgtgtgtttaagaccatgcagg 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 attatttgtttatcatattatttgttatgctttcctgctgtgtgtttaagaccatgcagg 652
Query: 105 tggtcacaattaatcaatttctttttaatgtcaaggccaatggaggatctgctccttgaa 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tggtcacaattaatcaatttctttttaatgtcaaggccaatggaggatctgctccttgaa 592
Query: 165 agtctcttgaacttgcgtggagaccttgctactttagccttgtctttcgattattccatg 224
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 591 agtctcttgaacttgggtggagaccttgctactttagcctcgtctttcgattattccatg 532
Query: 225 ttgtgagaatgagtcacagtctcacttgtcttcttgggaaacataaggaacatgtctgtc 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttgtgagaatgagtcacagtctcacttgtcttcttgggaaacataaggaacatgtctgtc 472
Query: 285 cacattcacttgtctttaaataatactggttataggcaaccaaagtggggtctccatggc 344
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 471 cacattcacttgtctttaaataatactggttagaggcaaccaaagtggggtctccatggc 412
Query: 345 ctttctgaacaaaagcataggtcccttacaagactcataggcaactctgcaacttttttg 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ctttctgaacaaaagcataggtcccttacaagactcataggcaactctgcaacttttttg 352
Query: 405 agatatgcccaacaatcccctgggacctagttgaccttgaagggcaagagtcaaaatact 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agatatgcccaacaatcccctgggacctagttgaccttgaagggcaagagtcaaaatact 292
Query: 465 ttatgttttaattgatgttcacatcgtctaagcctccaattgcaattatca 515
|||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 291 ttatgttttaattgatgttcacattgtctaagcctccaattgcaattatca 241
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_c21.g1 MSMg01no275_c21.g1 CHROMAT_FILE:
MSMg01no275_c21.g1 PHD_FILE: MSMg01no275_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:52 2005
(298 letters)
>mm_chr4_31046231_31046924
Length = 694
Score = 520 bits (269), Expect = e-152
Identities = 289/297 (97%), Gaps = 4/297 (1%)
Strand = Plus / Plus
Query: 1 agtgaattttctgggtgtgaaatacccatgtttgcacctcatcattgagctgtaacccag 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgaattttctgggtatgaaatacccatgtttgcacctcatcattgagctgtaacccag 260
Query: 61 atcaaaagggttttgttatcattcttttttacaatcattaggtgggatgtataataaaga 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaaaagggttttgttat---tcttttttacaatcattaggtgggatgtataataaaga 317
Query: 121 aaagagatagtaatgcatccaattgttagtgcaagaattgaatgatggactaaagtttat 180
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 318 aaaaagatagtaatgcatccaattgttagtgcaagaattga-tgatggactaaagtttat 376
Query: 181 gagcactctaaacttataatagattaaaaggattatcaattaacaatgacactgatatat 240
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 377 gagcactctgaacttataatagattaaaaggattatcaattaacaatgacgctgatatat 436
Query: 241 ttatttatcaagattttgttggaaatctaaatgtcagaacctgtgaatactccagaa 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttatttatcaagattttgttggaaatctaaatgtcagaacctgtgaatactccagaa 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 694
Length adjustment: 9
Effective length of query: 289
Effective length of database: 685
Effective search space: 197965
Effective search space used: 197965
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
