Query= MSMg01no278_f07.b1 MSMg01no278_f07.b1 CHROMAT_FILE:
MSMg01no278_f07.b1 PHD_FILE: MSMg01no278_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:38 2005
(290 letters)
>mm_chr4_83899527_83900217
Length = 691
Score = 516 bits (267), Expect = e-151
Identities = 285/291 (97%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 ggtttcagaggcttagtgagaaagaatgacattgggttaaaaacttc-ttccctttataa 59
||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||
Sbjct: 491 ggtttcagaggcttagtgagaaagaatgacattgggttaaaaacttcttttcatttataa 432
Query: 60 aatccatccaaatgtataataaagagccctccgtccttcttccttaagcttcccttgctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aatccatccaaatgtataataaagagccctccgtccttcttccttaagcttcccttgctt 372
Query: 120 gcagcctactcagggctgtgttgaatcctcactggatatttggggtccaacgtctgcttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gcagcctactcagggctgtgttgaatcctcactggatatttggggtccaacgtctgcttg 312
Query: 180 agcagaggaaccctggggccaaatcagctaattctttacaattcctattcattttttaca 239
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aacagaggaaccctggggccaaatcagctaattctttacaattcctattcattttttacc 252
Query: 240 atttctattctgtgtttgttagagaaattatttatattgatctttgttgtg 290
||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 251 atttctattctgtgtttgttagagagattatttatattgatctttgttgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no278_f07.g1 MSMg01no278_f07.g1 CHROMAT_FILE:
MSMg01no278_f07.g1 PHD_FILE: MSMg01no278_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:38 2005
(229 letters)
>mm_chr4_83711376_83712006
Length = 631
Score = 385 bits (199), Expect = e-111
Identities = 221/233 (94%), Gaps = 10/233 (4%)
Strand = Plus / Plus
Query: 3 attccgggcatgattttggctcttgcctctctctctctttccctctcagttatcttgttt 62
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 203 attccgggcatgattttggctcttgcctctctctctctttctctctcagttatcttgttt 262
Query: 63 ttgtatcaggaatttccctcccctcccctggcagaaaccatctgcttaggacccagatct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttgtatcaggaatttccctcccctcccctggcagaaaccatctgcttaggacccagatct 322
Query: 123 gtccccagggctgtcagcgaggccccaatatttttctcccatcctgagta----tttttg 178
|||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 323 gtccccagggctgtcagcgaggccccaatatttttctcccatcctgaggacaact----g 378
Query: 179 gtctggacccaaagagtggat--ggggggggggggaagcttgggagaaagaag 229
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 379 gtctggacccaaagagtggattgggggggggggggaagcttgggagaaagaag 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 631
Length adjustment: 9
Effective length of query: 220
Effective length of database: 622
Effective search space: 136840
Effective search space used: 136840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
