Query= MSMg01no288_g12.b1 MSMg01no288_g12.b1 CHROMAT_FILE:
MSMg01no288_g12.b1 PHD_FILE: MSMg01no288_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:29 2005
(314 letters)
>mm_chr4_11074805_11075518
Length = 714
Score = 592 bits (306), Expect = e-173
Identities = 309/310 (99%)
Strand = Plus / Minus
Query: 5 gaattctccttcaggatccagagaaggaaacctgttcacatatcaaatgacagctgccct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattctccttcaggatccagagaaggaaacctgttcacatatcaaatgacagctgccct 455
Query: 65 ggcagcctatatactcaatactgaaggctcatgaggtcagcgagttcatggcagggatca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ggcagcctatatactcaatactgaaggctcatgaggtcagcgagttcatggcagggatca 395
Query: 125 gggagaaaagataggcttgtctgacaaactaaaacaccttagaaaccaggtctaaaggtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gggagaaaagataggcttgtctgacaaactaaaacaccttagaaaccaggtctaaaggtt 335
Query: 185 gaatattttgaaactatgaccagccttggcctatttgtttgaactgagcttagtcaactt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaatattttgaaactatgaccagccttggcctatttgtttgaactgagcttagtcaactt 275
Query: 245 gatggtgaacttggcaggtctcccacggccgtttcagagggttacatcatgggatttcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gatggtgaacttggcaggtctcccacggccgtttcagagggttacatcatgggatttcca 215
Query: 305 tatacagatc 314
||| ||||||
Sbjct: 214 tatgcagatc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_g12.g1 MSMg01no288_g12.g1 CHROMAT_FILE:
MSMg01no288_g12.g1 PHD_FILE: MSMg01no288_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:29 2005
(289 letters)
>mm_chr4_10905918_10906605
Length = 688
Score = 511 bits (264), Expect = e-149
Identities = 282/288 (97%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1 actgtgtagagcaggctggcctcgaactcacagagatccgcctgcctcttccatctaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgtagagcaggctggcctcgaactcacagagatccgcctgcctcttccatctaaat 260
Query: 61 ttagggattaaagacacgtgtcaccatactagtttaaaacatacgtttttaagaaaaata 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 ttagggattaaagacacgtgtcaccatgctagtttaaaacatacgtttttaagaaaaata 320
Query: 121 aaataaatgtgtgtaaaattaaaacgttcctgcacacactagcacagcagagaacctcca 180
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 321 aaataaatgtgtgtaaaattaaaacgttcctgcacacactaacacagtagagaacctcca 380
Query: 181 gaaccggggacactccctgtcatctgtccctcagactgggagctaatagctagcatatgt 240
|||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 gaacaggggacactcc-tgtcatctgtccctcagactgggagttaatagctagcatatgt 439
Query: 241 aaagaaatgaaaaaactaacaccacaaacacaaaatgccagtcaatga 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaagaaatgaaaaaactaacaccacaaacacaaaatgccagtcaatga 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
