Query= MSMg01no294_i18.b1 MSMg01no294_i18.b1 CHROMAT_FILE:
MSMg01no294_i18.b1 PHD_FILE: MSMg01no294_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:15 2005
(291 letters)
>mm_chr4_102719150_102719839
Length = 690
Score = 524 bits (271), Expect = e-153
Identities = 286/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 ggaaagaacccgggtgtccctcaacagaggaatggatgatgttttaacatgtagattcgt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaaagaacccaggtgtccctcaacagaggaatggatgatgttttaacatgtagattcgt 260
Query: 61 cttctgtgaattagcatttttacatatttgctcatttaaaaatatcctgagctttctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttctgtgaattagcatttttacatatttgctcatttaaaaatatcctgagctttctttt 320
Query: 121 ctgattgttaaagttctttatatatactagaaaagaaaatagttaacttaaaaaaaaacc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 321 ctgattgttaaagttctttatatatactagaaaagaaaatagctaacttaaaaaaaa-cc 379
Query: 181 ctaaaattcatgattcttcctcttaagaaaaactattacaatatattctaacatcttata 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 380 ctaaaattcatgattcttcctcttaagaaaaaatattacaatatattctaacatcttata 439
Query: 241 gtttttcaaaacatatttattcaacaaacatttactgcatacccctgctgc 291
||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 440 gtttttcaaaacatatttattcaacaaacatttactgcatacccccgctgc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no294_i18.g1 MSMg01no294_i18.g1 CHROMAT_FILE:
MSMg01no294_i18.g1 PHD_FILE: MSMg01no294_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:15 2005
(287 letters)
>mm_chr4_102870788_102871473
Length = 686
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 tttacctatatatggatgggtctttctcagtttgcgtattctttaactgtctttgtcttt 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tttacctacatatggatgggtctttctcagtttgcgtattctttaactgtctttgtcttt 427
Query: 61 gagggtgttccttttaaaataggagcagtgactcagtaggtaaggtggggtgtgatttgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gagggtgttccttttaaaataggagcagtgactcagtaggtaaggtggggtgtgatttg- 368
Query: 121 tatcacatacagggttagagccctgagagcagagaggaaagtagtgaaactgtctgggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tatcacatacagggttagagccctgagagcagagaggaaagtagtgaaactgtctgggag 308
Query: 181 ctagtttcctgtctgaggcaggagcagggtgcagagggagaaagggggcagctggttata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctagtttcctgtctgaggcaggagcagggtgcagagggagaaagggggcagctggttata 248
Query: 241 cagtatggagtggaatacgacgggtagtccatggccactgccattgg 287
||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 247 cagtatggagtggaatacgacgggtagtctatggccactgcccttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
