Query= MSMg01no294_o13.b1 MSMg01no294_o13.b1 CHROMAT_FILE:
MSMg01no294_o13.b1 PHD_FILE: MSMg01no294_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:41 2005
(355 letters)
>mm_chr4_84814816_84815570
Length = 755
Score = 584 bits (302), Expect = e-171
Identities = 352/390 (90%), Gaps = 36/390 (9%)
Strand = Plus / Plus
Query: 1 tacagagtgagttccaggacagccagggctacacagaggaa-ccttgtctcaaaaaaaa- 58
|||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||
Sbjct: 167 tacagagtgagttccaggacagccagagctacacagaggaaacct-gtctcaaaaaaaag 225
Query: 59 -------------------------atcttttctctctt--------tacatgtatttga 85
|||||||||||||| |||||||||||||
Sbjct: 226 aaaaagaaaaagaaaaagaaaaagaatcttttctctcttacaacctttacatgtatttga 285
Query: 86 ttatctattgcatgcatgcattctcacagaatagcctgcatgttgaggtcagacaacaac 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttatctattgcatgcatgcattctcacagaatagcctgcatgttgaggtcagacaacaac 345
Query: 146 agctgaagtcagttctccccttcccccatgtagatcagtgggatcaaatttaggttgcta 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agctgaagtcagttctccccttcccccatgtagatcagtgggatcaaatttaggttgcta 405
Query: 206 gacttggtggcaagtctctttacctactgagtcatcatgtcagaagtcgccttgcacctt 265
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gacttggtggcaagtatctttacctactgagtcatcatgtcagaagtcgccttgcacctt 465
Query: 266 ttaaaagtattcatctttattgagataaaattcataaaccatttgagttattattttaac 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttaaaagtattcatctttattgagataaaattcataaaccatttgagttattattttaac 525
Query: 326 acagacagttcagacctttcacataacaat 355
||||||||||||||||||||||||||||||
Sbjct: 526 acagacagttcagacctttcacataacaat 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_o13.g1 MSMg01no294_o13.g1 CHROMAT_FILE:
MSMg01no294_o13.g1 PHD_FILE: MSMg01no294_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:41 2005
(293 letters)
>mm_chr4_84900457_84901152
Length = 696
Score = 524 bits (271), Expect = e-153
Identities = 288/295 (97%), Gaps = 3/295 (1%)
Strand = Plus / Minus
Query: 1 aagtgtacaaagattctcaggaggacattcaaactgctgatgaaatggtacccaaggtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aagtgtacaaagattctcaggaggacattcaaactgctgatgaaatggtacccaaggtgt 436
Query: 61 cacatacatttcagagatacaaattaacagaatctcccagagtaattttattgtttgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cacatacatttcagagatacaaattaacagaatctcccagagtaattttattgtttgcat 376
Query: 121 tatgatcaaatttaggattattctactcctaaattacaagaatattttatgggtaaagac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 375 tatgatcaaatttaggattattctactcctaaattacaagaatattttatgggtgaagac 316
Query: 181 attcactgtaaaattatctttaggaaaatgaaaatggtcatagttctc---tcacagaat 237
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
Sbjct: 315 attcactgtaaaattatctttaggaaaaagaaaatggtcatagttctcctctcacagatt 256
Query: 238 attaattatataaacaagcatataaatacattataaaattatctatagatattta 292
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 255 attaattatataaacaagcatacaaatacattataaaattatctatagatattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 696
Length adjustment: 9
Effective length of query: 284
Effective length of database: 687
Effective search space: 195108
Effective search space used: 195108
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
