CCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTGCCAGACCAGTGGTACAGGTTCCTTCCAGTCTGGGTCAG
TGCCCTGAGCACATCTTGGGACAGAGCTCTGCAGCCAGTCCCACAACACC
CAGAAGATCCACTCCCAGATATTTTAACACACCCAGGATCCCGGAATCAG
AGTATCACAGAAACAGCTGGACTCTGAGAAACAGCTGGACTCTGAGAAGT
TCTAACACAACCAGGATCACAAGAAGGACAGGATCCAGTCAGATATAGTG
AGGACAGGTAGTACTAGTGAGAACCAGATGGAGGGAGGCAAACATAATAA
CATAAGCAATAGAAACCAAGGTTATTTGGGTCATCAGAACCCAAATCTCC
CAACACAGCAAGTCCTGGATACACCAACACACTGGAAAAGCAAGATTTGG
GTCTAAAATCACTTCTCATGATGATGATAGAGGACTTTAAGAAGGACATA
AATAACTTCCTTAAAGAAATACAGGAGAACACAGGTAAATAGCTAGAAAC
CCTTAAAGAGGAAACACAAAAATCCCTTAAAGAATTACAGCAAAACACAA
TCAAACAGGCAAAGAAAATGAAGAAAACCATCCAAGAACTAAAAATGGAA
ATAGAAACAATAAAGAAATCACAAAGGGAGACAGCCCTGGAGTTAAAAAA
CCTTGGAA

NCTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGCTTGACTTCAAACTAG
TTGTGACAATTTGTTCTAATCTTCTGGCACCTTCTCTTTATGCTTCCTTT
CTTCCCTTGCAACCTGTTTCTGTCAAACTGTCCCAGTACAAACTGCCTCT
GAACTCCACAATCTGAATGGCCACCCACTGAACTGTCAGTAGCTCAATAC
TTTACTCAGCTGAACTACATGGCCAGAAGACAACTGACTGAACAAAACTG
ACCTGATTTCCCTGACTTCACTCAAATGTTCTGACTCTGAAATTCTTAAC
TTTGAACAGCACTAAGCTGACTGACTGATTGAACCCAGATCTACATGCAT
CTGACTCCTGGGTGCTGAAATTAAGGGAGAATACAACCACACCTGGACCT
AAGCTTTCTTTACCTGAAACTTGCTGTGTACCAGGTTTCCTTGAACTCAG
AAATTTGCTTGTCTCTGTCTCCTAGGATTCTAGCCAGATCACACAAACTG
AGAAGGTCTTTGCATGTGATCACTTGCCAAAACAACCATGTTTTCTGGAT
GAAAAATTTTCTACAAGTTTAAAACTAATTCAGGAAAGAACACACTCTGT
ATGTTTACTAGAAAACTTTGAAGCTGTTAATTGGAGGAAAAAGCTGCCCT
GC

Query= MSMg01no301_j02.g1 MSMg01no301_j02.g1 CHROMAT_FILE:
MSMg01no301_j02.g1 PHD_FILE: MSMg01no301_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:00 2005
         (622 letters)



>mm_chr4_20976931_20977952
          Length = 1022

 Score = 1195 bits (618), Expect = 0.0
 Identities = 621/622 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgcttgacttcaaactagttgtgacaatttgttctaatcttctggcaccttctcttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tctgcttgacttcaaactagttgtgacaatttgttctaatcttctggcaccttctcttta 570

                                                                       
Query: 61  tgcttcctttcttcccttgcaacctgtttctgtcaaactgtcccagtacaaactgcctct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgcttcctttcttcccttgcaacctgtttctgtcaaactgtcccagtacaaactgcctct 510

                                                                       
Query: 121 gaactccacaatctgaatggccacccactgaactgtcagtagctcaatactttactcagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaactccacaatctgaatggccacccactgaactgtcagtagctcaatactttactcagc 450

                                                                       
Query: 181 tgaactacatggccagaagacaactgactgaacaaaactgacctgatttccctgacttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgaactacatggccagaagacaactgactgaacaaaactgacctgatttccctgacttca 390

                                                                       
Query: 241 ctcaaatgttctgactctgaaattcttaactttgaacagcactaagctgactgactgatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctcaaatgttctgactctgaaattcttaactttgaacagcactaagctgactgactgatt 330

                                                                       
Query: 301 gaacccagatctacatgcatctgactcctgggtgctgaaattaagggagaatacaaccac 360
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 329 gaacccagatctacatgcatctgactcctgagtgctgaaattaagggagaatacaaccac 270

                                                                       
Query: 361 acctggacctaagctttctttacctgaaacttgctgtgtaccaggtttccttgaactcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 acctggacctaagctttctttacctgaaacttgctgtgtaccaggtttccttgaactcag 210

                                                                       
Query: 421 aaatttgcttgtctctgtctcctaggattctagccagatcacacaaactgagaaggtctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aaatttgcttgtctctgtctcctaggattctagccagatcacacaaactgagaaggtctt 150

                                                                       
Query: 481 tgcatgtgatcacttgccaaaacaaccatgttttctggatgaaaaattttctacaagttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgcatgtgatcacttgccaaaacaaccatgttttctggatgaaaaattttctacaagttt 90

                                                                       
Query: 541 aaaactaattcaggaaagaacacactctgtatgtttactagaaaactttgaagctgttaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  aaaactaattcaggaaagaacacactctgtatgtttactagaaaactttgaagctgttaa 30

                                 
Query: 601 ttggaggaaaaagctgccctgc 622
           ||||||||||||||||||||||
Sbjct: 29  ttggaggaaaaagctgccctgc 8


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)