TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTATACATTGAATATGAATTATTTTGATCATACCTCTCATGCTATTCTT
TCAACTGCTTAGCTACCTCCGCAACCCTTCCTTTCAATAAGTTCCCCTCT
TGTCTTTTTTTTTTTTTTAATGATACACCGAGTTTAATTAGGACTACTTG
CATAAGTATAGGTAGGAATCTTAAAAATCTTAAAGTAATGAAGTGAATTT
TGTTTTTTTGTTTGTTTCTGAGTATATCAGAAAATTGTCTATAATGACTG
TAATGGTGCCATTTATTTATTTATTGTTTGGTTTTTCTCAACCTGACACT
AGTGTTTTCAATTTAAAAAACAAAATCCCCTTTTAGATTGCTTATGGGCA
AATCTGGGATATTTTCTTGATTAATGATTATGTGGGAAGGCCCAGCCCAC
TGTGGATAGTACCACCCCCTCACCGGTAGTCCTGGACAGTATTAAAAAGA
AAGCTGAGCAAGCTAAGGGCAGCAACCCAGTAAGCAACACTCTCTGACGT
TAGAGTTTCAGTTCCTGCTTCCAGGTTCCTGCCCTGAGTTCCTACATTGG
CTTCCATGATAATAGACTGTAAGCTGTAAAACTAAATTAACCCTTTTTTC
CCCAGGCTGCCTGTAGTCATGATGTTTTATCACTACAGTAGAAACCATAA
TTGAGTTAGAGTATATTTGACATATATACCCTAGTCTACAATGTTACTAA
TAAA

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCATGGCCTCTTTTGCACACACACACACA
CATACACACACACACACACCCCCACATGTCCATTTAGCAAACACTGTAAT
AGATTGTTCTCTATAGCCTATGAACTCTATAACCATGCATATTTATATAT
AGTTATACATATAGTTATAGATGTATATGTATATCTATAACTTGTTTATT
CTTGTTTTATTTATAACTACTGACCTTTGGTTATCTGTAAAGAAACACAC
ATACACATATCAACCTCCAAATATATATATTCCAAAACACATAAATGTAC
TTTGCCCAGTCTATATGTTACTTGTATAAATATGCTTTTAAAGATCATCA
CTTATTATTGTATCACCAATTGGGAAAACTTTCTGTGTGAAAGACTAGTT
CCTCTATTTCATTTTCCCATAGTTCTTTGTCTAGCATTTAAGCCCAACAA
GTTTTTCCCCTTCCATCCTAACATGCCAATATATGTCATTGTCATTGTTC
ACATTTTCTGCAGCAAGGTTGATGGTAGTCCATCAGTAAAATGCTCTGAA
ATATCTACAAGATGTGATACAACAAACTTTCTGTTCATTTGGCTTTCAGA
ATCTTCCAACCTCCTCCTTTGCAATGATCCCTAACCCATAGGTGCTTGAG
TTGTATTGTAGGTGTATCAAGGGGGACCAGTTACCACATATCTGGTTCTA
TGN

Query= MSMg01no303_e15.b1 MSMg01no303_e15.b1 CHROMAT_FILE:
MSMg01no303_e15.b1 PHD_FILE: MSMg01no303_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:10 2005
         (694 letters)



>mm_chr4_74921695_74922788
          Length = 1094

 Score = 1234 bits (638), Expect = 0.0
 Identities = 644/646 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctatacattgaatatgaattattttgatcatacctctcatgctattctttcaact 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gaattctatacattgaatatgaattattttgatcatacctctcatgctattctttcaact 587

                                                                       
Query: 65  gcttagctacctccgcaacccttcctttcaataagttcccctcttgtctttttttttttt 124
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gcttagctacctctgcaacccttcctttcaataagttcccctcttgtctttttttttttt 527

                                                                       
Query: 125 ttaatgatacaccgagtttaattaggactacttgcataagtataggtaggaatcttaaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttaatgatacaccgagtttaattaggactacttgcataagtataggtaggaatcttaaaa 467

                                                                       
Query: 185 atcttaaagtaatgaagtgaattttgtttttttgtttgtttctgagtatatcagaaaatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atcttaaagtaatgaagtgaattttgtttttttgtttgtttctgagtatatcagaaaatt 407

                                                                       
Query: 245 gtctataatgactgtaatggtgccatttatttatttattgtttggtttttctcaacctga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtctataatgactgtaatggtgccatttatttatttattgtttggtttttctcaacctga 347

                                                                       
Query: 305 cactagtgttttcaatttaaaaaacaaaatccccttttagattgcttatgggcaaatctg 364
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 346 cactagtgttttcaatttaaaaaagaaaatccccttttagattgcttatgggcaaatctg 287

                                                                       
Query: 365 ggatattttcttgattaatgattatgtgggaaggcccagcccactgtggatagtaccacc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ggatattttcttgattaatgattatgtgggaaggcccagcccactgtggatagtaccacc 227

                                                                       
Query: 425 ccctcaccggtagtcctggacagtattaaaaagaaagctgagcaagctaagggcagcaac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ccctcaccggtagtcctggacagtattaaaaagaaagctgagcaagctaagggcagcaac 167

                                                                       
Query: 485 ccagtaagcaacactctctgacgttagagtttcagttcctgcttccaggttcctgccctg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ccagtaagcaacactctctgacgttagagtttcagttcctgcttccaggttcctgccctg 107

                                                                       
Query: 545 agttcctacattggcttccatgataatagactgtaagctgtaaaactaaattaacccttt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 agttcctacattggcttccatgataatagactgtaagctgtaaaactaaattaacccttt 47

                                                         
Query: 605 tttccccaggctgcctgtagtcatgatgttttatcactacagtaga 650
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  tttccccaggctgcctgtagtcatgatgttttatcactacagtaga 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space:   741456
Effective search space used:   741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)