NCCCGGTTTNNNNNNNNCTCATTGCNCGCTATAGACTCCTATGGGAGAGG
ATCCGCGGAATTCTTTGTTCAGTTCTGAGCCCTATAGTTTTATGGGGTTA
TTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATAT
TAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTG
GTGGTCTCTTTGTCTTATTGACAGTGTCTTTTGCCTTGCAGAAACTTTGG
AGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCAT
TGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTT
TCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGT
TCTTTGATCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATC
GATTCGCATTCTTCTACATGATCACAACCAGTTGTGCCAGCACCAATTGT
TGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAG
ATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATT
CCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTACCA
CAATTGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAG
GTTCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTATT
CCAGATGAATTTGCAAATTGCTCCTTCTAATTCGTTGAAGAATTGAGTTG
GAATTTTGATGGGGATTGCATTGAATCTGTAGATTGCTTTTGGCAAGATA
GCCATTTTTACAATGTTGATCCTGCCCATCCATGAGCATGTGAGATCTTT
CCATCTTCCGAGATCTTCTTTAATTTCTTTCTCAGAGACTTGAAGTTTTA
TCATACCGAACTTTTACTTCCTTAGTTAGAGTCCCGCCGAGATATTTTAT
ATTAATTTTGACTATTGAAAAAGGGGTGGTTCCCCAAATTTTTTTCTCAC
CTGTTTATTCTTTTGGGAAAAAAAGACCCTTGAACTGTTTTGAATTTTTT
TTTTTCCGGCCAATTCTCCTAAATTGTTATTAACTAATAAAATCCCTTGG
TGTAATTTTTTGTGATCATTCGTCCAGATTCTTTAATCCCTTTAAAATCT
ATTCATTTTTTTATAATATATTATATCCCTTATTTATATTCTATA

NCCGGTCCCATNNNNNATCTGCATGGAGGCTGGGGXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTGAGAAAACATGATA
AATTTGACATTCTCTAAGATAACCTTTTAGTATTGTATGCCTCAAGAAAA
CTCATTTAGAATAAATATTAGATTAATATTTGTAGAATTCTGGGAACCAA
CTTTAAAAGATATTATTAAAATACCAGCCTAATTCTTTTGGAATAAAAAA
AAGCACTACAACTCATGTTCTCACTGTAACTCACAACTTCCAGTATTTAT
TAATGTAGAAAACTGTAGAGATTGTGTGAAATCCTGAGTAAATGCATGTG
TTACCACAAGCAGAGTAATGTCAAGGACTTCTGTGCTTCAGCCTCATGGG
AATGGCAAAACTTTTCTTCGGTACAGAGGGATTGAAAAATCCTTCCTCTT
GTCCATGTGTGTATATTGAGAGACATGTTTCCATTAGAGTGGACAAACCA
CCCAATTCGAGCATTTCTCTGTCTGTGTATCTTTCCTTTCTTCATTCCCT
TGCTGTCCTATTCCAGGGTCCAGGACTCTAGTGATTCAAGGATGTGATAG
AAAATGGGAAAGGGTTTTGCATTTATGTTCTGAATATATTCCTCAGGAGA
AAAATTATTTCAAATCTTCAAATTTCAAAGAAGTGGCATTAAGTTATTAA
TTGTCTCCCTGTTAATCTAGAAAACAAAAGACATACAAACAACCACAGAG
GCTCTCAAAGATGTTTGATGTACTTCAAGTGGGAGCAGAAAGATCACAGA
GAACACCTGCCTGCAGATTATATCAAGAAGCTGTTTATCTGTTGAAGGGA
AGGATTTAGCTAACAGCAATGCACCTGAGAAGTTAATGTGCAGCACTGAG
ATCCTATCAAAAGGCTGTTTAACACTTCCCTAAACCACTTAATCCTACAA
ATTTACATTGGGTAGCTCTTGCAGACTAATAAATATATGCCCCCAAAGGA
TTTTCAGGGGAATAATCCCCATTAATTTGTCCCAAATTTTTAAAGAAGGA
CCCTGATTACAATAAAGAAACCCCTCTTTTCCTGGGAAACCCCTGGGAAG
GGTTTAGGGGCCTTCCCTAAACCTCCCCCAAAAAATAAATTTCCTTCCCA
TTTTTTAAAAAATTATAGGTAAAGAACAACCCTCACCACCCTGCGGTGGG
TTTAGATTTCCCCACAGTTTGTTTTAGAAAGAAA

Query= MSMg01no305_l24.g1 MSMg01no305_l24.g1 CHROMAT_FILE:
MSMg01no305_l24.g1 PHD_FILE: MSMg01no305_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:05 2005
         (779 letters)



>mm_chr4_20385935_20387114
          Length = 1180

 Score = 1454 bits (752), Expect = 0.0
 Identities = 773/782 (98%), Gaps = 5/782 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattgtatgcctcaagaaaactcatttagaataaatattagattaatatttgtagaattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattgtatgcctcaagaaaactcatttagaataaatattagattaatatttgtagaattc 260

                                                                       
Query: 61  tgggaaccaa---ctttaaaagatattattaaaataccagcctaattcttttggaataaa 117
           ||||||  ||   |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tgggaa--aaaaactttaaaagatattattaaaataccagcctaattgttttggaataaa 318

                                                                       
Query: 118 aaaaagcactacaactcatgttctcactgtaactcacaacttccagtatttattaatgta 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aaaaagcactacaactcatgttctcactgtaactcacaacttccagtatttattaatgta 378

                                                                       
Query: 178 gaaaactgtagagattgtgtgaaatcctgagtaaatgcatgtgttaccacaagcagagta 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaaaactgtagagattgtgtgaaatcctgagtaaatgcatgtgttaccacaagcagagta 438

                                                                       
Query: 238 atgtcaaggacttctgtgcttcagcctcatgggaatggcaaaacttttcttcggtacaga 297
           ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 439 atgtcaaggacttctgtgcttcagcctaatgggaatggcaaaacttttcctcggtacaga 498

                                                                       
Query: 298 gggattgaaaaatccttcctcttgtccatgtgtgtatattgagagacatgtttccattag 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gggattgaaaaatccttcctcttgtccatgtgtgtatattgagagacatgtttccattag 558

                                                                       
Query: 358 agtggacaaaccacccaattcgagcatttctctgtctgtgtatctttcctttcttcattc 417
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agtggacaaaccacccaattcaagcatttctctgtctgtgtatctttcctttcttcattc 618

                                                                       
Query: 418 ccttgctgtcctattccagggtccaggactctagtgattcaaggatgtgatagaaaatgg 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ccttgctgtcctattccagggtccaggactctagtgattcaaggatgtgatagaaaatgg 678

                                                                       
Query: 478 gaaagggttttgcatttatgttctgaatatattcctcaggagaaaaattatttcaaatct 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gaaagggttttgcatttatgttctgaatatattcctcaggagaaaaattatttcaaatct 738

                                                                       
Query: 538 tcaaatttcaaagaagtggcattaagttattaattgtctccctgttaatctagaaaacaa 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tcaaatttcaaagaagtggcattaagttattaattgtctccctgttaatctagaaaacaa 798

                                                                       
Query: 598 aagacatacaaacaaccacagaggctctcaaagatgtttgatgtacttcaagtgggagca 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aagacatacaaacaaccacagaggctctcaaagatgtttgatgtacttcaagtgggagca 858

                                                                       
Query: 658 gaaagatcacagagaacacctgcctgcagattatatcaagaagctgtttatctgttgaag 717
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 gaaagatcacagagaacacctgcctgcagattatatcaagaagctgtttatctgttgaag 918

                                                                       
Query: 718 ggaaggatttagctaacagcaatgcacctgagaagttaatgtgcagcactgagatcctat 777
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 ggaaggatttagctaacagcaatgcacctgagaagttaatgtgcagcactgagatcctat 978

             
Query: 778 ca 779
           ||
Sbjct: 979 ca 980


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 779
Length of database: 1180
Length adjustment: 10
Effective length of query: 769
Effective length of database: 1170
Effective search space:   899730
Effective search space used:   899730
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)