ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTATAAAGGCACACTTTAATTCCTTTACTTCATAAAGTTAGAAAGCATA
CAAAAATGGATGCGATTCTGACTTCATCCAGATGACCAAAATTAAGCTAT
GAAGTGATCAGCAGCATAAATAGACACAAAAAGGTGATTGAAACAACAAC
AACAAAACAACAACAATAATAATAACAATAACAAAAAGCATTCTGATTTT
TAAAAAGCCCTGAACCAGATAGTTTCCCAGTAGAATTATACCAGGCTTTC
AAAGAACTAGAAAAAGTAATTATAAAACAAACACTCAGAAAAAAAAAAAA
GTAAGAAGGAATGTTTTTAGAACACACACGCACCAAGACCACTTAGCACT
TCCAAATTTCTTCTACAAGTTAAGTAGGCCTTTAATACCCAAATATCAAG
CAAGCTAAGGACACAACAACAACAACAACAACAACAACAACAACAACAAC
AAAAACAACAAAAACCCCAAAAACAAAAAACAAAACAAAACAAAAAAAAA
CCTACAGGCCAATTCATCCCATGAAAATACACGCTGACATGGTGTGGATT
GATGCTTGTTTTTCTGCTCCCTCAAGAAGAGTGCCCATACTCAGATGAGG
TTAGGGTGAATCTTAATCAGCAGATAAGGCTAAAGCCTGTGATTGGAAAG
AAAGGCAAGCTGAAAGTTTAGGGGGGGGAAGGAAGGAGAAACC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGACACTCAGAACCCATATGAAAG
CCAAGCACAGCAACATATCAGCAACCATATCACTATGCTATGTGAACACA
AACAGCTTGATAGCCAGTCTAGACAAGTTTGTGAGCTCTAGAATCAATGA
GAGACTTTTGTCTTAAAAGATAATGTCTACAGTGAGATTTGAAGACATAT
AATATTACCACTGGCCTCTACATGTAAGTGCATAGGTGAGTATACCTACA
CACATGCACACACGTGCATACATACAATACATATATATTATAGAAATAGA
CATACTCACAAATGTATGAATAAAAATGCTTCCTAAGACTGAGATCTTAT
TAGTACACCAACTCACACTATAAAAATTTCTCTTTATACAGAAACAAAAT
ATGTCCTGTCCTGCATGACATCAACAAATAGCTCCAATTTTGCCCTCAGA
GCAGTATAATCCTTGCTCCATACAGCAGTTTACCTGTTTGTGTTTATTAT
ACATATTTTTTCTTTAGGACATAAAGTCTATTTAATGTGGATTTTTTTTC
TGAAATGTTTAGAGCCATCCTACAAAATCTGATTGAGAACTTGAATCTTG
AGGGAGGAGAGTAGATAAGCAGAGAGGAATGGGTCTCAAACGCTGCTCCA
CAAGGAAGAGAAATTCAATATTCATCAGTTGCTATGGATGATGTC

Query= MSMg01no306_n11.g1 MSMg01no306_n11.g1 CHROMAT_FILE:
MSMg01no306_n11.g1 PHD_FILE: MSMg01no306_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:44 2005
         (589 letters)



>mm_chr4_22802408_22803396
          Length = 989

 Score =  961 bits (497), Expect = 0.0
 Identities = 503/505 (99%)
 Strand = Plus / Minus

                                                                       
Query: 85  tagccagtctagacaagtttgtgagctctagaatcaatgagagacttttgtcttaaaaga 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 tagccagtctagacaagtttgtgagctctagaatcaatgagagacttttgtcttaaaaga 930

                                                                       
Query: 145 taatgtctacagtgagatttgaagacatataatattaccactggcctctacatgtaagtg 204
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 929 taatgtctacagtgagatttgaagacatataatattaccgctggcctctacatgtaagtg 870

                                                                       
Query: 205 cataggtgagtatacctacacacatgcacacacgtgcatacatacaatacatatatatta 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 cataggtgagtatacctacacacatgcacacacgtgcatacatacaatacatatatatta 810

                                                                       
Query: 265 tagaaatagacatactcacaaatgtatgaataaaaatgcttcctaagactgagatcttat 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tagaaatagacatactcacaaatgtatgaataaaaatgcttcctaagactgagatcttat 750

                                                                       
Query: 325 tagtacaccaactcacactataaaaatttctctttatacagaaacaaaatatgtcctgtc 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tagtacaccaactcacactataaaaatttctctttatacagaaacaaaatatgtcctgtc 690

                                                                       
Query: 385 ctgcatgacatcaacaaatagctccaattttgccctcagagcagtataatccttgctcca 444
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 689 ctgcatgacatcaacaaatagctccaattttgccctcggagcagtataatccttgctcca 630

                                                                       
Query: 445 tacagcagtttacctgtttgtgtttattatacatattttttctttaggacataaagtcta 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tacagcagtttacctgtttgtgtttattatacatattttttctttaggacataaagtcta 570

                                                                       
Query: 505 tttaatgtggattttttttctgaaatgtttagagccatcctacaaaatctgattgagaac 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tttaatgtggattttttttctgaaatgtttagagccatcctacaaaatctgattgagaac 510

                                    
Query: 565 ttgaatcttgagggaggagagtaga 589
           |||||||||||||||||||||||||
Sbjct: 509 ttgaatcttgagggaggagagtaga 485


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)