CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAAGTTATTATCCGGAGAAAAATTTGATCTGATGGAGTGCCGACAGTG
AGATATGACAGTTAATTGCAGTTCTCACTTGAATGTGATGAGAAATGCTC
AGGAAGGACTGGAGAGACGCTTGCTCTAACGGAGAACCCAGGTTTGATTT
CTAGAATCCCACATAATTGCATACAACTCTCCATTACAGGATCTGACACC
CTCTTTTGGCCTCTACAGGTACTAACTGCTATGTTTTGTTTTGTTTTGTT
TTGTTTTGTTTTGTTTTGTTTTGTTGTCCTGTCTTTTTTTTTTGATTTTT
TTAAAAATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATA
CCAAAAGTCCCCCATACCCAACCACCCCCACTCCCCTACCCACCCACTCC
CCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCGT
GTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGAT
ACATGTGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGCTCATAATG
TTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCT
CTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAG
CATCCACTTCTGTGTTTGCTAGGCCCCGGCAT

ATTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAATAGATTAAGCCTTTTTCTTGAGT
TTAGAATTAGTCTGATGAAGCATCATTCTGGCCTGCAGAATATATAATTT
TGCCCAACTCACCATTCTTTGGCCCTGAGCTTTATTAGATTCTCAAACAA
AATTTGTTGAAAGTATGAATTAGTGAGTATCATTAACTTTTATTTGGGCA
TGCAAGATAATGGAAACAAGCTTTTAAAACCATTTCCAATAAAAAGCTTT
GAAATAACAGCCACAATACTTCTGTTTACATTTCATGAAATGATTTGGTT
ACAAAGGCTTCTCTCTCTTAAGATCATGCTATTTGACATAGTTTCATCAT
CTGTGTATAGGCATCGAGAGCTGTAGGCAATGACATGGTTAAGAGAGGTA
ATGGTACATTTTGTATGAGACATAAAGACATATACTAATACTAAAGTGAT
AGTTGTAGGATTTGTAATTTATTATGTATATATTGAAAATGAAGCACCAT
TATGAGTCTTTATATAATTATGCTGGTCTTTTTGAATACACTTCCATGGA
GTTATTACTTTCATTTTCCATATAAAAGCTTTATCTTAAAAAGGTTGATT
GACATTTTTGCCTAGCATCATTATTAGAAGTTGAACCAAGACTGANAGAT
ATACTACCAGTTTTGATAAACTATCTAGCAAGAAAGTTN

Query= MSMg01no307_b04.g1 MSMg01no307_b04.g1 CHROMAT_FILE:
MSMg01no307_b04.g1 PHD_FILE: MSMg01no307_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:02 2005
         (662 letters)



>mm_chr4_65598956_65600017
          Length = 1062

 Score = 1243 bits (643), Expect = 0.0
 Identities = 657/662 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caatagattaagcctttttcttgagtttagaattagtctgatgaagcatcattctggcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 caatagattaagcctttttcttgagtttagaattagtctgatgaagcatcattctggcct 803

                                                                       
Query: 61  gcagaatatataattttgcccaactcaccattctttggccctgagctttattagattctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gcagaatatataattttgcccaactcaccattctttggccctgagctttattagattctc 743

                                                                       
Query: 121 aaacaaaatttgttgaaagtatgaattagtgagtatcattaacttttatttgggcatgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aaacaaaatttgttgaaagtatgaattagtgagtatcattaacttttatttgggcatgca 683

                                                                       
Query: 181 agataatggaaacaagcttttaaaaccatttccaataaaaagctttgaaataacagccac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agataatggaaacaagcttttaaaaccatttccaataaaaagctttgaaataacagccac 623

                                                                       
Query: 241 aatacttctgtttacatttcatgaaatgatttggttacaaaggcttctctctcttaagat 300
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 622 aatacttctgtttacatttcatgaaatgatttggttacaaaggcttttctctcttaagat 563

                                                                       
Query: 301 catgctatttgacatagtttcatcatctgtgtataggcatcgagagctgtaggcaatgac 360
           ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 562 catgctatttgacgtagtttcatcatctgtgtataggcatcgagagttgtaggcaatgac 503

                                                                       
Query: 361 atggttaagagaggtaatggtacattttgtatgagacataaagacatatactaatactaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atggttaagagaggtaatggtacattttgtatgagacataaagacatatactaatactaa 443

                                                                       
Query: 421 agtgatagttgtaggatttgtaatttattatgtatatattgaaaatgaagcaccattatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agtgatagttgtaggatttgtaatttattatgtatatattgaaaatgaagcaccattatg 383

                                                                       
Query: 481 agtctttatataattatgctggtctttttgaatacacttccatggagttattactttcat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agtctttatataattatgctggtctttttgaatacacttccatggagttattactttcat 323

                                                                       
Query: 541 tttccatataaaagctttatcttaaaaaggttgattgacatttttgcctagcatcattat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tttccatataaaagctttatcttaaaaaggttgattgacatttttgcctagcatcattat 263

                                                                       
Query: 601 tagaagttgaaccaagactganagatatactaccagttttgataaactatctagcaagaa 660
           ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 262 tagaagttgaaccaagactgaaagatatactactagttttgataaactatctagcaagaa 203

             
Query: 661 ag 662
           ||
Sbjct: 202 ag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)