Query= MSMg01no311_f10.b1 MSMg01no311_f10.b1 CHROMAT_FILE:
MSMg01no311_f10.b1 PHD_FILE: MSMg01no311_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:10 2005
(152 letters)
>mm_chr4_33569178_33569729
Length = 552
Score = 275 bits (142), Expect = 1e-78
Identities = 145/146 (99%)
Strand = Plus / Plus
Query: 5 gaattcagctctttgctgccatagcaggctaagtctgtctgtacgtcattcctatgctag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagctctttgctgccatagcaggctaagtctgtctgtacgtcattcctatgctag 264
Query: 65 tgaccatcaggttgtaagttctagaagatcttcctgctgcctttttatgctaagatagtg 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaccatcaggttgtaagtcctagaagatcttcctgctgcctttttatgctaagatagtg 324
Query: 125 agtctgtgttggggctatgtgtgcgg 150
||||||||||||||||||||||||||
Sbjct: 325 agtctgtgttggggctatgtgtgcgg 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no311_f10.g1 MSMg01no311_f10.g1 CHROMAT_FILE:
MSMg01no311_f10.g1 PHD_FILE: MSMg01no311_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:10 2005
(248 letters)
>mm_chr4_33730214_33730861
Length = 648
Score = 426 bits (220), Expect = e-124
Identities = 241/248 (97%), Gaps = 2/248 (0%)
Strand = Plus / Minus
Query: 1 tctcccagatcactagtctccaccatctcttctcccacatccacacacgctgcccttcag 60
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 447 tctcccagatcactagtctccaccgtctcttctcccacatccacacatgctgcccttcag 388
Query: 61 cagcccttcatagcccactgaagtcgggcacactggcttcctgtgcctatgtgtggatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cagcccttcatagcccactgaagtcgggcacactggcttcctgtgcctatgtgtggatct 328
Query: 121 tgctgcccatggatctccttgttttcctttgtccattgataatcaccatagaaggttctg 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 327 tgctgcccatggatctccttgttttcctttgtccattgatagtcaccatagaaggttctg 268
Query: 181 atggtcaccactatccct-ccactgcttaattaccacacagggccttcccatccgtgaca 239
|||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| |
Sbjct: 267 atggtcaccactat-cctaccactgcttaattaccacacagggccttcccatctgtgaaa 209
Query: 240 cccacatc 247
||||||||
Sbjct: 208 cccacatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
