Query= MSMg01no313_h22.b1 MSMg01no313_h22.b1 CHROMAT_FILE:
MSMg01no313_h22.b1 PHD_FILE: MSMg01no313_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:15 2005
(209 letters)
>mm_chr4_8756023_8756637
Length = 615
Score = 366 bits (189), Expect = e-106
Identities = 202/209 (96%), Gaps = 6/209 (2%)
Strand = Plus / Plus
Query: 1 gaaccacgtgggtctccctaccgtgtgagttccagggagtgaactcaggttttcagaact 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaccacgtgggtctccctaccatgtgagttccagggagtgaactcaggttttcagaact 260
Query: 61 tttacctgctgagccagctcaccagcccagcttctcatttttaatgtacatttgaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttacctgctgagccagctcaccagcccagcttctcatttttaatgtacatttgaaaaag 320
Query: 121 -a-----atcctgtagaatgtagtggcagagttgagaacttctgtagatgtcttgttatt 174
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattgttatcctgtagaatgtagtggcagagttgagaacttctgtagatgtcttgttatt 380
Query: 175 gagagtggatgatgggaaggaaccttctg 203
|||||||||||||||||||||||||||||
Sbjct: 381 gagagtggatgatgggaaggaaccttctg 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 615
Length adjustment: 9
Effective length of query: 200
Effective length of database: 606
Effective search space: 121200
Effective search space used: 121200
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no313_h22.g1 MSMg01no313_h22.g1 CHROMAT_FILE:
MSMg01no313_h22.g1 PHD_FILE: MSMg01no313_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:15 2005
(321 letters)
>mm_chr4_8914320_8915041
Length = 722
Score = 553 bits (286), Expect = e-162
Identities = 311/324 (95%), Gaps = 9/324 (2%)
Strand = Plus / Minus
Query: 1 cttaggagagctcaatggtttaatttaataattatttgagttccagctt-----cccccc 55
|||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 520 cttaggagagctgaatggtttaatttaataattatttgagttccagcttttgta----ca 465
Query: 56 ctttcagctctgccctgagagcaaagggttaggggaatgggaggagatacagtgtgtggc 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ctttcagctctgccctgagagcaaagggttaggggaatgggaggagatacagtgtgtggc 405
Query: 116 ttctaggagcactagtaacttgcttttggtgaatgcctgtttcaggcaagaagtcctttg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ttctaggagcactagtaacttgcttttggtgaatgcctgtttcaggcaagaagtcctttg 345
Query: 176 gtatggctcacttaactcttccaagatgctatcaaaaacatatcagcacttagttaacct 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gtatggctcacttaactcttccaagatgctatcaaaaacatatcagcacttagttaacct 285
Query: 236 tgcctggggaccacacaggatctctgtgttaagggtctgggggctgaggacagtgctgcc 295
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 284 tgcctggggaccacacaggatctctgtgttaagggtctggggactgaggacagtgctgcc 225
Query: 296 agtgtgaatgcgggtcctttagca 319
|||||||||| |||||||||||||
Sbjct: 224 agtgtgaatgggggtcctttagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 722
Length adjustment: 9
Effective length of query: 312
Effective length of database: 713
Effective search space: 222456
Effective search space used: 222456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
