Query= MSMg01no313_l11.b1 MSMg01no313_l11.b1 CHROMAT_FILE:
MSMg01no313_l11.b1 PHD_FILE: MSMg01no313_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:44 2005
(264 letters)
>mm_chr4_82692855_82693518
Length = 664
Score = 495 bits (256), Expect = e-144
Identities = 262/266 (98%), Gaps = 4/266 (1%)
Strand = Plus / Minus
Query: 1 agtggggacttgggcagttggaaagaggcttcacagactagagagactcaggagctgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 agtggggacttgggcagttggaaagaggcttcacagactagagagactcaggagctgatg 396
Query: 61 tggggagtttaaggaaggtcagaagtcatgcttggtcagctggtcggtggccaagagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tggggagtttaaggaaggtcagaagtcatgcttggtcagctggtcggtggccaagagatg 336
Query: 121 ggggtacaagaagagccaagagaggagggaagggaaagccaatctcacaccccaaaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggggtacaagaagagccaagagaggagggaagggaaagccaatctcacaccccaaaggga 276
Query: 181 atccagaaagcacacaatctcgctccatccctctgataaagacctgagcccttctcattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atccagaaagcacacaatctcgctccatccctctgataaagacctgagcccttctcattg 216
Query: 241 ctgtggtggggg----ggggttggag 262
|||||||||||| ||||||||||
Sbjct: 215 ctgtggtggggggggaggggttggag 190
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no313_l11.g1 MSMg01no313_l11.g1 CHROMAT_FILE:
MSMg01no313_l11.g1 PHD_FILE: MSMg01no313_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:44 2005
(343 letters)
>mm_chr4_82523775_82524517
Length = 743
Score = 574 bits (297), Expect = e-168
Identities = 328/343 (95%), Gaps = 8/343 (2%)
Strand = Plus / Plus
Query: 1 cgtgctgggaatccaaccctgatcccctcagaagagcacccaacactgttcacctctgag 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 cgtgctgggaatccaaccctgatcccctcagaagagcacccatcactgttcacctctgag 260
Query: 61 catcctccccagccagatggataaaggaggtctttaactccttgtttaaaaaaacagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcctccccagccagatggataaaggaggtctttaactccttgtttaaaaaaacagttg 320
Query: 121 ttgggtagaaagcagtcctgccatgcatgaggctatagattccgttttcaacagcacaca 180
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 321 ttgggtagaaagcagtcctgccatgcatgaggctatagattttgtattcaacagcacaca 380
Query: 181 cataacacatgctcacataacctggaaatgtcttctcctaaaaggagttaaggcttccaa 240
||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 381 cataacacatgctcacataacctggaaatgtcttctcctaaaagg--------cctccaa 432
Query: 241 acacatagtaaagtctcaaccattcgaagctattcctgtgcctgcaacagtctttgcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 acacatagtaaagtctcaaccattcgaagctattcctgtgcctgcaacagtctttgcctc 492
Query: 301 actgctgcacacactgtctttgctgcataccaaaaggcttgaa 343
||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 493 actgctgcacacactgtctttgctgcataccgaaaggtttgaa 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
