Query= MSMg01no313_o09.b1 MSMg01no313_o09.b1 CHROMAT_FILE:
MSMg01no313_o09.b1 PHD_FILE: MSMg01no313_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:08 2005
(431 letters)
>mm_chr4_141395448_141396278
Length = 831
Score = 710 bits (367), Expect = 0.0
Identities = 393/402 (97%), Gaps = 1/402 (0%)
Strand = Plus / Plus
Query: 17 gaattctctctctggccctagccccagtaattttttcattttcattgtgtgtgtgcgtgc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gaattctctctctggccctagccccagtaattttttcattttcattgtgtgtgtgcgtgc 277
Query: 77 acgtgcacacgtgcgcatgcccccatgtgtacatgcatacatgcgacagggcatgtgtgg 136
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 278 acgtgcacacgtgcacatgcacccatgtgtacatgcatacatgcgacagggcatgtgtgg 337
Query: 137 agatcacagggcaactgtgggagctgatcctctccttccaccatgtgggtttctggggac 196
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 338 agatcacagggcaactgtgggagctgatcctctccttccaccatgtgggtt-ctggggac 396
Query: 197 caaactcgggtcaccagacttggtagaaagggcctttcccctttaaaccacctctcccct 256
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 397 caaactcgggtcaccagacttggtagaaagggcctttcccctttaaaccacctttcccct 456
Query: 257 gctggcactttagagagaacgtcagcagccctcccagttgctgacattgggacttgaact 316
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 457 gctggcactttagagagaacgacagcagccctcccagttgctggcattgggacttgaact 516
Query: 317 tgagtggcccaggtccagccttctgcctctccccatgcactgggggtgagcatatagggg 376
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 517 tgagtggcccaggtccagccttctgcctctccccatgcactgggggtgagcataaagggg 576
Query: 377 tggactggagtgatggctttcccttaggccctcatggntcac 418
||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 577 tggactggagtgatggctttcccttaggcccgcatggttcac 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_o09.g1 MSMg01no313_o09.g1 CHROMAT_FILE:
MSMg01no313_o09.g1 PHD_FILE: MSMg01no313_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:08 2005
(208 letters)
>mm_chr4_141558069_141558676
Length = 608
Score = 366 bits (189), Expect = e-106
Identities = 201/205 (98%)
Strand = Plus / Minus
Query: 1 aacgaggccgagggcaccttcgtccttcaggactttaactcccgcaacggcacgcccgcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 405 aacgaggccgagggcaccttcgtccttcaggactttaactcccgcaacggcacgtttgtc 346
Query: 61 aacgagtgccacattcagaatgtggcggtgaagctgatccctggggacattctgcggttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aacgagtgccacattcagaatgtggcggtgaagctgatccctggggacattctgcggttc 286
Query: 121 gggtctgcagggatgacctacgagctggtcattgagaacccgtccccggtgagcccagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gggtctgcagggatgacctacgagctggtcattgagaacccgtccccggtgagcccagcc 226
Query: 181 tctatgtggtggtgtgtgggggtgg 205
|||||||||||||||||||||||||
Sbjct: 225 tctatgtggtggtgtgtgggggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 608
Length adjustment: 9
Effective length of query: 199
Effective length of database: 599
Effective search space: 119201
Effective search space used: 119201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
