Query= MSMg01no317_l13.b1 MSMg01no317_l13.b1 CHROMAT_FILE:
MSMg01no317_l13.b1 PHD_FILE: MSMg01no317_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:46 2005
(304 letters)
>mm_chr4_102782167_102782870
Length = 704
Score = 565 bits (292), Expect = e-165
Identities = 298/300 (99%)
Strand = Plus / Plus
Query: 1 accctaacaattggagatgacagagaaaaaaagaccacagcttccagagaacggacactt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 accctaacaattggagatgacagagaaaaaaagatcacagcttccagagaacggacactt 260
Query: 61 gatgtaaccagggatcagaaactgtgaaggacaattggctgaagaatgagcagaggctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgtaaccagggatcagaaactgtgaaggacaattggctgaagaatgagcagaggctag 320
Query: 121 cttaaaacataaaaccctctaggagcagctgtaaggagccagcaggctttcatcttacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttaaaacataaaaccctctaggagcagctgtaaggagccagcaggctttcatcttacct 380
Query: 181 ccataaactcaccaggtggatggaaactggtcacacacccacagcaacctgttctcctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccataaactcaccaggtggatggaaactggtcacacacccacagcaacctgttctcctta 440
Query: 241 gcaagtacctatccttacagaatgccattttaccagagctgaaacaacttgttaccaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 gcaagtacctatccttacagaatgccattttaccagagctgaaacaacttgttacgaagg 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_l13.g1 MSMg01no317_l13.g1 CHROMAT_FILE:
MSMg01no317_l13.g1 PHD_FILE: MSMg01no317_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:46 2005
(296 letters)
>mm_chr4_102959474_102960165
Length = 692
Score = 513 bits (265), Expect = e-150
Identities = 285/293 (97%), Gaps = 4/293 (1%)
Strand = Plus / Minus
Query: 1 agacacaaaatgttcctggctccaagtggaagctcttgtccagataaactatctgtctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 489 agacacaaaatgttcctggctccaagtggaagctcttgtccagataaac---c-gtctcc 434
Query: 61 tccaaaatcttcccttgtcttcctgctggagaccctcaaagcttgcagtgtccatacatg 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 433 tccaaaatcttcccttgtcttcctactggagaccctcaaagcttgcagtgtccatacatg 374
Query: 121 atgacacctggatccagacctccctctctcacccatagtagccaaagcttttatggattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atgacacctggatccagacctccctctctcacccatagtagccaaagcttttatggattg 314
Query: 181 gctcatgatccatgagacctccctatctcacctcgagctttgagcttatatgcagaatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 313 gctcatgatccatgagacctccctatctcacctcgagctttgagcttatatgcagaagac 254
Query: 241 ctgatgtctgtctatgtcctcatggtccagaattttctcagcctaagtttttt 293
|||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 253 ctgatgtctgtctatgtcctcatggtccagaattttctcaacttaagtttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 692
Length adjustment: 9
Effective length of query: 287
Effective length of database: 683
Effective search space: 196021
Effective search space used: 196021
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
