Query= MSMg01no322_c10.b1 MSMg01no322_c10.b1 CHROMAT_FILE:
MSMg01no322_c10.b1 PHD_FILE: MSMg01no322_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:03 2005
(355 letters)
>mm_chr4_67747652_67748406
Length = 755
Score = 652 bits (337), Expect = 0.0
Identities = 346/349 (99%)
Strand = Plus / Plus
Query: 1 taaacatgtcatggcttggtaatgatatatcagtaatacaaaatgcaaagttactgtccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaacatgtcatggcttggtaatgatatatcagtaatacaaaatgcaaagttactgtccc 260
Query: 61 tcactatctatggctagtaatatgaaacttgttcagactctgatttactcatgtacaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcactatctatggctagtaatatgaaacttgttcagactctgatttactcatgtacaaat 320
Query: 121 atattctaaataaattgatggttcatgaaagcctccttcatctgatcctgtcttcagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atattctaaataaattgatggttcatgaaagcctccttcatctgatcctgtcttcagtct 380
Query: 181 tttcatatcttgtctcttttccttgatccctaaatccttctcttccaccccttccctcct 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 tttcatatcttgtctcttttccttgatccctaaatccttctcttctaccccttccctcct 440
Query: 241 cctttcatccgtcatacctccctccctccttcccttacttctttccttcccttccttcct 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttccatccgtcatacctccctccctccttcccttacttctttccttcccttccttcct 500
Query: 301 tccttccttccttccttccttccttccttacttccttccttccttcctt 349
||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 tccttccttccttccttccttccttccttccttccttccttccttcctt 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_c10.g1 MSMg01no322_c10.g1 CHROMAT_FILE:
MSMg01no322_c10.g1 PHD_FILE: MSMg01no322_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:03 2005
(340 letters)
>mm_chr4_67906728_67907472
Length = 745
Score = 613 bits (317), Expect = e-180
Identities = 336/345 (97%), Gaps = 5/345 (1%)
Strand = Plus / Minus
Query: 1 tgtgaaggaacttaactttattctgctgaatcaccagcatagtaactacatgaaaagcag 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgtgaaggaacttaactttatactgctgaatcaccagcatagtaactacatgaaaagcag 486
Query: 61 atgaaccaaatc-----tacttcacacagcactgtgtagataacaggctcttaataagta 115
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gtgaaccaaatctacagtacttcacacagcactgtgtagataacaggctcttaataagta 426
Query: 116 cttctgtaatcaatcaattaaagactgattttagataaaattatggttcatgatggaatg 175
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 425 cttctgtaatcaatcaattaaagattgattttagataaaattatggttcatgatggaatg 366
Query: 176 tgacagactattatgggacattttatgagatggtgtttaataaccttcacatctacttca 235
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 365 tgacagactattatgggacattttatgagatggagtttaataaccttcacatctacttca 306
Query: 236 actctcataagaatgtcttattttattcatctaccaagtcttaagacctggatattactg 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 actctcataagaatgtcttattttattcatctaccaagtcttaagacctggatattactg 246
Query: 296 ttattttttctttttctgagaatgaaaattggcatttgtttgaca 340
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttattttttctttttctgagaatgaaaattggcatttgtttgaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 745
Length adjustment: 9
Effective length of query: 331
Effective length of database: 736
Effective search space: 243616
Effective search space used: 243616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
