Query= MSMg01no322_m08.b1 MSMg01no322_m08.b1 CHROMAT_FILE:
MSMg01no322_m08.b1 PHD_FILE: MSMg01no322_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:48 2005
(320 letters)
>mm_chr4_155599607_155600326
Length = 720
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%)
Strand = Plus / Minus
Query: 5 gaattctggggcaagtctgagggtgtggaatgaccaaagtgaagttgtacagagtaggcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattctggggcaagtctgagggtgtggaatgaccaaagtgaagttgtacagagtaggcc 460
Query: 65 gtattgaagataaggactgaactcagtgataccaacttaagtttataccatagagcgcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtattgaagataaggactgaactcagtgataccaacttaagtttataccatagagcgcag 400
Query: 125 agctgtaactgcagggagcattatatgtatatgtgtggtatgcatatattccacttttta 184
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 399 agctgtaactgcagggagcattatatttatatgtgtggtatgcatatattccacttttta 340
Query: 185 tgtgacgaggcttaggtgtgtgtggtgtgcgtgtatgtgtgtgttcttgaggaatgcatt 244
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 339 tgtgacgaggcttaggggtgtgtggtgtgcatgtatgtgtgtgttcttgaggaatgcatt 280
Query: 245 ctgtggccacgcacggacagatcagaactatatacagaagctgtgtgtatatcgcttggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctgtggccacgcacggacagatcagaactatatacagaagctgtgtgtatatcgcttggg 220
Query: 305 gatccggccccatct 319
|||||||||||||||
Sbjct: 219 gatccggccccatct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_m08.g1 MSMg01no322_m08.g1 CHROMAT_FILE:
MSMg01no322_m08.g1 PHD_FILE: MSMg01no322_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:48 2005
(289 letters)
>mm_chr4_155422867_155423559
Length = 693
Score = 470 bits (243), Expect = e-137
Identities = 280/293 (95%), Gaps = 4/293 (1%)
Strand = Plus / Plus
Query: 1 ctagacaaaagtttgtgcctcccatcacatcaagtgaataaacccagtgtgttgggtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagacaaaagtttgtgcctcccatcacatcaagtgaataaacccagtgtgttgggtgaa 260
Query: 61 tgacgagacggtacagagagctc--tgactgggaa-gacaagacaaggccttcggatagg 117
||| ||||||||||||||| ||| |||||||||| | ||||||||||||| |||||||
Sbjct: 261 tgatgagacggtacagagaactctgtgactgggaagggtaagacaaggcctttggatagg 320
Query: 118 agcaggtcagccttaaggaggaagacaggcctgtggattgactgactgacagcaaagaaa 177
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 agcaggtcagccttaaggaggaagacaggtctgtggattgactgactgacagcaaagaaa 380
Query: 178 ggccaaatataggcatcatgtctatcaattctacccctactggatcaacaggagaagaaa 237
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ggccaaatatgggcatcatgtctatcaattctacccctactgaatcaacaggagaagaaa 440
Query: 238 aaaaaa-tccataaagttctgtagggtggagagaaatcctggaatgagaaact 289
|||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaaatccaaaaagttctgtagggtggagagaaatcctggaatgagaaact 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 693
Length adjustment: 9
Effective length of query: 280
Effective length of database: 684
Effective search space: 191520
Effective search space used: 191520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
