Query= MSMg01no327_h17.b1 MSMg01no327_h17.b1 CHROMAT_FILE:
MSMg01no327_h17.b1 PHD_FILE: MSMg01no327_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:23 2005
(378 letters)
>mm_chr4_126713789_126714565
Length = 777
Score = 576 bits (298), Expect = e-169
Identities = 322/334 (96%), Gaps = 9/334 (2%)
Strand = Plus / Minus
Query: 39 acttaagtcttgttctttcctgtttggtcacatatagcagcatgatggaagatgtagaac 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 acttaagtcttgttctttcctgtttggtcacatatagcagcatgatggaagatgtagaac 718
Query: 99 tctcgtggttttttccctttttaggcgggtctcactagctctgtttgtgctggtgcttca 158
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 717 tctcgtggttttttccctttttaggcgggtctcactag--ctgtttgtgctggtgcttca 660
Query: 159 cagatcagacaagacttgcctggaactcagatctgcctgcctcactgaaagtttgtttcc 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cagatcagacaagacttgcctggaactcagatctgcctgcctcactgaaagtttgtttcc 600
Query: 219 tttcaagacttcactgggtgttttgtagccccacccccacccccagttaatagtttaggg 278
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 599 tttcaagacttcactgggtgttttgtag------ccccacccccagtt-atagtttaggg 547
Query: 279 caccttatttaaaaccattaaatttgggcacacaatcagacaaatcctagaaaggagtcc 338
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 caccaaatttaaaaccattaaatttgggcacacaatcagacaaatcctagaaaggagtcc 487
Query: 339 tacttgaacaaagacaattttttaaaataaatta 372
|||||||||||||||||||||| |||||||||||
Sbjct: 486 tacttgaacaaagacaatttttaaaaataaatta 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 777
Length adjustment: 9
Effective length of query: 369
Effective length of database: 768
Effective search space: 283392
Effective search space used: 283392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_h17.g1 MSMg01no327_h17.g1 CHROMAT_FILE:
MSMg01no327_h17.g1 PHD_FILE: MSMg01no327_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:24 2005
(344 letters)
>mm_chr4_126522918_126523661
Length = 744
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Plus
Query: 1 agtgtttggtttacagataatctttccagcattgacattcacaaagcaatgacatgcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgtttggtttacagataatctttccagcattgacattcacaaagcaatgacatgcttt 260
Query: 61 gcgtgtgaccggttacaaacccaggtgcctggctgttttagcttgcaaaggctgatagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgtgtgaccggttacaaacccaggtgcctggctgttttagcttgcaaaggctgatagca 320
Query: 121 gggatgggggcacagccagaccctattctccctgctcctgctgactgtttggacggcagc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggatggaggcacagccagaccctattctccctgctcctgctgactgtttggacggcagc 380
Query: 181 ctcctgcaatcagagtatcttttaaaaaggagtaagcgttagggtcctgggtaacagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcctgcaatcagagtatcttttaaaaaggagtaagcgttagggtcctgggtaacagatg 440
Query: 241 gggaatctggctctgctccttggggccctctctgtgttgtcctctgtaacatgaagatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggaatctggctctgctccttggggccctctctgtgttgtcctctgtaacatgaagatag 500
Query: 301 gacagaacccctttcttgctggcctgctgtggcagtgcatgtca 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacagaacccctttcttgctggcctgctgtggcagtgcatgtca 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
