Query= MSMg01no330_i21.b1 MSMg01no330_i21.b1 CHROMAT_FILE:
MSMg01no330_i21.b1 PHD_FILE: MSMg01no330_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:17 2005
(671 letters)
>mm_chr4_20130006_20131075
Length = 1070
Score = 882 bits (456), Expect = 0.0
Identities = 462/464 (99%), Gaps = 1/464 (0%)
Strand = Plus / Minus
Query: 208 tgggtcaagaaaatatcactcaaaaacatcatcaatgacatatgactgataagaaactat 267
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 870 tgggtcaagaaaatatcactc-aaaacatcatcaatgacatatgactgataagaaactat 812
Query: 268 aaaattgtttactgctctcgaggtagtgggacctggggaaatggtgccaataaatgatgt 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 811 aaaattgtttactgctctcgaggtagtgggacctggggaaatggtgccaataaatgaggt 752
Query: 328 agactaaagtttcctgcagtagctgacttaattcagagatcagataatttttactctgag 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 agactaaagtttcctgcagtagctgacttaattcagagatcagataatttttactctgag 692
Query: 388 ggttaaaatgaggcacatgaataaactatatagtcataaggccaaaccacatattgtgga 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ggttaaaatgaggcacatgaataaactatatagtcataaggccaaaccacatattgtgga 632
Query: 448 catgacacacatggcaaaagtctgtttttccatggaggcttatatccagttgtaatgaat 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 catgacacacatggcaaaagtctgtttttccatggaggcttatatccagttgtaatgaat 572
Query: 508 aatcagaaataaactcatttctattggctagaccttggagaggcacaaaaacacattaca 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aatcagaaataaactcatttctattggctagaccttggagaggcacaaaaacacattaca 512
Query: 568 agaaaattttcatgttttagaacaaattgaggtcacagaactcttgtgagctttctcaaa 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 agaaaattttcatgttttagaacaaattgaggtcacagaactcttgtgagctttctcaaa 452
Query: 628 caaacacacaaaattctcctgacatgattccattcttggactgt 671
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caaacacacaaaattctcctgacatgattccattcttggactgt 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1070
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1060
Effective search space: 700660
Effective search space used: 700660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_i21.g1 MSMg01no330_i21.g1 CHROMAT_FILE:
MSMg01no330_i21.g1 PHD_FILE: MSMg01no330_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:17 2005
(249 letters)
>mm_chr4_20068307_20068954
Length = 648
Score = 439 bits (227), Expect = e-128
Identities = 242/247 (97%), Gaps = 1/247 (0%)
Strand = Plus / Plus
Query: 1 ttggctagctgtagcaactctggcaactgctgactaaattcatcctttcacctcctggga 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 201 ttggctagctgtagcaactctggcaactgctgactaaatttatcctttcacttcctggga 260
Query: 61 gtagctgaagcaaacccaggaaaatccaattttaaccagctcaacaaataaacatgagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtagctgaagcaaacccaggaaaatccaattttaaccagctcaacaaataaacatgagcc 320
Query: 121 tgtgagtgcctagcacacaaatggctaggagcatctctaatgggtagaactcccctagtg 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tgtgagtgcctagcacacaaatggctaggagcatctcta-tgggtagaactcccctagtg 379
Query: 181 ggtaaaggaggcaggccaccacttttctgtcatgtgcccaggttaataggacaccacctt 240
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 380 ggtaaaggaggcaggccaccatttttctgtcatgtgcccaggttaataggataccacctt 439
Query: 241 caggagg 247
|||||||
Sbjct: 440 caggagg 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 648
Length adjustment: 9
Effective length of query: 240
Effective length of database: 639
Effective search space: 153360
Effective search space used: 153360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
