Query= MSMg01no330_p05.b1 MSMg01no330_p05.b1 CHROMAT_FILE:
MSMg01no330_p05.b1 PHD_FILE: MSMg01no330_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:46 2005
(622 letters)
>mm_chr4_97583504_97584525
Length = 1022
Score = 1174 bits (607), Expect = 0.0
Identities = 619/623 (99%), Gaps = 1/623 (0%)
Strand = Plus / Plus
Query: 1 cagacctatcctgagaaagcaaacttatgggag-tgggggaagaaaccactaactggaca 59
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 200 cagacctatcctgagaaagcaaacttatgggaggtgggggaagaaaccactaactggaca 259
Query: 60 ttattatgatgctatactattgcagatgttaactggtacccatatattccaagtgtttaa 119
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 260 ttattatgatgctatactattgcagatgttaattggtacccatatattccaagtgtttaa 319
Query: 120 gaatcacagtgtagcagcatatacagagaccaagaaaaccagaagagtgagttgccaagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaatcacagtgtagcagcatatacagagaccaagaaaaccagaagagtgagttgccaagt 379
Query: 180 ccttgatctgaagagaagaatgaatgtgtgaatctagaaccagactaaagcagctataac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccttgatctgaagagaagaatgaatgtgtgaatctagaaccagactaaagcagctataac 439
Query: 240 tcatattgggcttcattctttggagccaattcagtaacttttctgaaccttagtttctca 299
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcatagtgggctttattctttggagccaattcagtaacttttctgaaccttagtttctca 499
Query: 300 ctgtgtaatatcagggtgatagtggctatatcacagagtctgcgctgacctgaagggagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgtgtaatatcagggtgatagtggctatatcacagagtctgcgctgacctgaagggagt 559
Query: 360 tcaggtataattgggattcttggatctactcaagggtggacataggctgaggcaatggag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaggtataattgggattcttggatctactcaagggtggacataggctgaggcaatggag 619
Query: 420 tcccaaaccagtcccattaaattggtctcactaattgcttagcatgatgtatcattgtcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcccaaaccagtcccattaaattggtctcactaattgcttagcatgatgtatcattgtcc 679
Query: 480 tctgagaatccctaggtaaatgtacagagagctgcacactctctgaacttgtctttctca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tctgagaatccctaggtaaatgtacagagagctgcacactctctgaacttgtctttctca 739
Query: 540 tttaaaacagtctggacagggagcgaggaaagtgatgcccttcctttcccatgctcctga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttaaaacagtctggacagggagcgaggaaagtgatgcccttcctttcccatgctcctga 799
Query: 600 aagcctatcacgcagctttgcgc 622
|||||||||||||||||||||||
Sbjct: 800 aagcctatcacgcagctttgcgc 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_p05.g1 MSMg01no330_p05.g1 CHROMAT_FILE:
MSMg01no330_p05.g1 PHD_FILE: MSMg01no330_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:46 2005
(659 letters)
>mm_chr4_97741906_97742971
Length = 1066
Score = 1201 bits (621), Expect = 0.0
Identities = 653/669 (97%), Gaps = 13/669 (1%)
Strand = Plus / Minus
Query: 1 atttttggatttgaatggcaggttcctccaaggtcactagagaatgttggacatattgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 866 atttttggatttgaatggcaggttcctccaaggtcactagagaatgttggagatattgga 807
Query: 61 gccctccttctcccc------cccccc-ccaacaaatctatttggcatgagcaagagggc 113
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 806 gccctccttctcccccccccaccccccgccaacaaatctatttggcatgagcaagagggc 747
Query: 114 aggacatgcatttgccatattaacatcacatagctggggatagcataggatgcgtaagtc 173
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 746 aggacatgcatttgccatattaatatcacatagctggggatagcataggatgcgtaagtc 687
Query: 174 ctttgaaaggcaaaaacttagaggtggtcttatatgaaagaatgggtattgttagttctc 233
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 686 ctttgaaaggcaaaaacttagaggtggtcttatatgaaagaatgggtattattagttctc 627
Query: 234 atcttgtatttttgaaatctagaggataaccattccaaattctcacagtttggatcatct 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 atcttgtatttttgaaatctagaggataaccattccaaattctcacagtttggatcatct 567
Query: 294 ctgtgcactcagttttttggttctattatctctgcaaatattttgtcttcacaaacaagt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctgtgcactcagttttttggttctattatctctgcaaatattttgtcttcacaaacaagt 507
Query: 354 tacaacagagaaacacagccctcggggcatgaaattagagtcctatcactcgtaagttat 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tacaacagagaaacacagccctcggggcatgaaattagagtcctatcactcgtaagttat 447
Query: 414 tacagagcaacatagcttccagcttccttcctggaaagctaacgaatcctaactttaatc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tacagagcaacatagcttccagcttccttcctggaaagctaacgaatcctaactttaatc 387
Query: 474 tattagcatcagtagtatgtacaagagcagt-tgcatgataggtgtaatggctaacagct 532
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 386 tattagcatcagtagtatgtacaagagcagtgtgcatgataggtgtaatggctaacagct 327
Query: 533 cgcaaaaggta--cggacagagtcaactcaggcagatggctttgcttttgatattttacg 590
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cgcaaaaggtaccc---cagagtcaactcaggcagatggctttgcttttgatattttacg 270
Query: 591 ttgtacagcgcctcctcagtggctcacaggaaggtcggaggcacaggtacagtatggata 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttgtacagcgcctcctcagtggctcacaggaaggtcggaggcacaggtacagtatggata 210
Query: 651 ccgagagag 659
|||||||||
Sbjct: 209 ccgagagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1066
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1056
Effective search space: 685344
Effective search space used: 685344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
