Query= MSMg01no331_i15.b1 MSMg01no331_i15.b1 CHROMAT_FILE:
MSMg01no331_i15.b1 PHD_FILE: MSMg01no331_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:27 2005
(166 letters)
>mm_chr4_54773725_54774291
Length = 567
Score = 315 bits (163), Expect = 7e-91
Identities = 166/167 (99%), Gaps = 1/167 (0%)
Strand = Plus / Minus
Query: 1 agaaatcccaagtgggactttcatgtgaagggccagactggtctcc-aaatattatgaat 59
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 367 agaaatcccaagtgggactttcatgtgaagggccagactggtctccaaaatattatgaat 308
Query: 60 tccatcaaattgacttttacctcctgaagaggatggaaggagaggaattccgtgtctctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tccatcaaattgacttttacctcctgaagaggatggaaggagaggaattccgtgtctctt 248
Query: 120 taaacattgatcatcctgggagaaatagactgggctttgaacagaag 166
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 taaacattgatcatcctgggagaaatagactgggctttgaacagaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 567
Length adjustment: 8
Effective length of query: 158
Effective length of database: 559
Effective search space: 88322
Effective search space used: 88322
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no331_i15.g1 MSMg01no331_i15.g1 CHROMAT_FILE:
MSMg01no331_i15.g1 PHD_FILE: MSMg01no331_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:27 2005
(613 letters)
>mm_chr4_54612362_54613375
Length = 1014
Score = 1137 bits (588), Expect = 0.0
Identities = 608/615 (98%), Gaps = 2/615 (0%)
Strand = Plus / Plus
Query: 1 tttgttcagttctgagccccattttttaatggggttatttgattttctgaagtccacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tttgttcagttctgagccccattttttaatggggttatttgattttctgaagtccacctt 259
Query: 61 cttgagttctttatatatgttggatattagtcccctatctgatttagggtaggtaaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cttgagttctttatatatgttggatattagtcccctatctgatttagggtaggtaaagat 319
Query: 121 cctttcccaatctgttggtggtctttttgtcttattgacggtgtcttttgccttgcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctttcccaatctgttggtggtctttttgtcttattgacggtgtcttttgccttgcagaa 379
Query: 181 gctttggagtttcatgaggtcccatttgtcaattctcgatcttacagcacaagccattgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gctttggagtttcatgaggtcccatttgtcaattctcgatcttacagcacaagccattgc 439
Query: 241 tgttctattctttaatttttcccctgtgcccatatcttcaaggcttttccccactttctc 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgttctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccactttctc 499
Query: 301 ctctataagttttagtgtctctgattttatgtgaagttcctccaaggaacttttcaaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctctataagttttagtgtctctgattttatgtgaagttcctccaaggaacttttcaaccg 559
Query: 361 ctaaggtttcatatctatgtttgactttgntttttttttttttttttttt-agtattcta 419
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 560 ctaaggtttcatatctatgtttgactttgttttttttttttttttttttttagtattcta 619
Query: 420 gagttagtagtgtacaagtgggagctgggatggggaaagttcacctctaagatacatcta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gagttagtagtgtacaagtgggagctgggatggggaaagttcacctctaagatacatcta 679
Query: 480 ggtgactagaaagtgatttatgtgctaggaagaacagagacaaggcgaacttcaaatcta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggtgactagaaagtgatttatgtgctaggaagaacagagacaaggcgaacttcaaatcta 739
Query: 540 acttctgggaatttacagttgtttaattttttagcagttatcctgttttttttt-cttac 598
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 740 acttctggtaatttacagttgtttaattttttagcagttatcctgttttttttttcttac 799
Query: 599 tctttgtttcccctg 613
|||||||||||||||
Sbjct: 800 tctttgtttcccctg 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1014
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1004
Effective search space: 605412
Effective search space used: 605412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
