CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTATTCTGATCATTTTCCATTTTTTAGGTGGATTATTTGGTTTGT
TGATATCTAGTTTCTTCAGGGAAGATATTTATGTATGTAAATTGATTAGT
TAGACATGAAGTTGATGAAAACCTTTTCTCATTCAGTAGGCTGCCTTTCT
GTCCTAGTGACAATGTCCTTTGCCTTATAGAAGCTTTTCAGGTTCATAAG
GTCCCATTTATTAATTGTTGACCTTATTGACTTGCTACTGTTCTCTTGAA
GTTGTCTTCTGTACAGATGTGTTCAAGGATGTTCCCTGCTTTCTCTTCTA
TTAAATTCAGTATAAACTGGTTCTAAATTGGGGTCTTTGATCCACTTGAA
CTTGAGTTTTGTAGAATGTGATAGTTGTAGATCTATTTACATTTTTCTGA
ATGCTGATATCTAGTTAAACCAGCAGCCTTGGTTGAAGACAGTTTCTTTC
CTCCATTGTGTATTTCTGGTTTTTTTTTTTAAAATCAGTTGTCTGTAGGT
GTATGGACTTATGTCTGGTCCTTTAATACTATTTCATTGGNNCATACATT
TTTTATGCCAACGCCATGTACCTTATGATGATACTATTGTTATATAGAAC
AGCTTAAAATTGAAAGAAAGGATACCGTTGGGAAGGCTTGTTTTGGATTG
GCAAACTTTGGGTTTTCTGGTTGGGTTTTTTTTTTTAAAAAAGAAG

NNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTATCTCTGTACCCCCCTT
ATTAAATACCAACTGAAACAATATTTACTAAGTTGTCTGCCTCCTTTAAT
ATTTCAGGGAATGATAGTATCCTTACATGGAATATATTGCAGATTTCTAA
CAAACCACTGAAGAAAACAAAGGATCAGTAGTTATATTTGGCAAATCAAA
TATGAATTATAAAAAGATGTAAGCCCTGAATAATAGTTTACTACAATATC
AATTAAAATTAAGCTCAAATATTCAGGATTGTCAACTCAATTCAGTCCAT
ATAGATTTATTAGCATTTTGTAAAGCATTCTGGATTTCTTTTCTTTGTGT
TCTGCTTGGTTGTTCTTAGTTATTGTTTTGAGATATGGTGGGCTTAATCA
GTTGGCCACTCTGACATATAACTTGCATTACTTACACATAACTTTATGAG
TAACTAGGCCTGTTAACATGTAACATTGCACCTAGCTCTAATGTGATGAC
ATTTTTCTTTCTTGAAGAAAAAAAATGTACTGTACCAGAAGGTTGGCTAA
GGAAATTGTTCTGCTGCAGTTTCCAGGGGATAATGATTTAGAAAGTCTCC
AACATTCTTTGCACGTAATCTTCTCGGTTATCATGCCAATAATCAAATCC
GCTTTGTAAAAACCATTCTATTTCAAGATGGGAAACCCCCTAAAAA

Query= MSMg01no340_m21.g1 MSMg01no340_m21.g1 CHROMAT_FILE:
MSMg01no340_m21.g1 PHD_FILE: MSMg01no340_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:53 2005
         (455 letters)



>mm_chr4_26138737_26139596
          Length = 860

 Score =  859 bits (444), Expect = 0.0
 Identities = 454/460 (98%), Gaps = 5/460 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttgtttatctctgtaccccccttattaaataccaactgaaacaa-----tatttactaa 55
           |||||||||||||||||||||||||||||||||||||||||||||     ||||||||||
Sbjct: 660 tttgtttatctctgtaccccccttattaaataccaactgaaacaatactttatttactaa 601

                                                                       
Query: 56  gttgtctgcctcctttaatatttcagggaatgatagtatccttacatggaatatattgca 115
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gttgtctgcctcctttaatatttcagggaatgatagtatccttacatggaatatattgca 541

                                                                       
Query: 116 gatttctaacaaaccactgaagaaaacaaaggatcagtagttatatttggcaaatcaaat 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gatttctaacaaaccactgaagaaaacaaaggatcagtagttatatttggcaaatcaaat 481

                                                                       
Query: 176 atgaattataaaaagatgtaagccctgaataatagtttactacaatatcaattaaaatta 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atgaattataaaaagatgtaagccctgaataatagtttactacaatatcaattaaaatta 421

                                                                       
Query: 236 agctcaaatattcaggattgtcaactcaattcagtccatatagatttattagcattttgt 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agctcaaatattcaggattgtcaactcaattcagtccatatagatttattagcattttgt 361

                                                                       
Query: 296 aaagcattctggatttcttttctttgtgttctgcttggttgttcttagttattgttttga 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aaagcattctggatttcttttctttgtgttctgcttggttgttcttagttattgttttga 301

                                                                       
Query: 356 gatatggtgggcttaatcagttggccactctgacatataacttgcattacttacacataa 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gatatggtgggcttaatcagttggccactctgacatataacttgcattacttacacataa 241

                                                   
Query: 416 ctttatgagtaactaggcctgttaacatgtaacattgcac 455
           ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 240 ctttatgagtaactaggcctgttaacatgtaccattgcac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 860
Length adjustment: 10
Effective length of query: 445
Effective length of database: 850
Effective search space:   378250
Effective search space used:   378250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)