NTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTCCCTGTGTGCAGCTCTCCTTAATAGTGTCTCATGTCTCTGGC
TATGTAACATCTTGGGAGTCTCCATTGCAACTCAGGCTTCACTTCCACAG
CTTCATGGAGTGGCATCTCATGGCTTCTAGGCTGGGACTTCTCTGTCAGG
CATTGCTTATTAGCCTTGTGGCTCTTTGAAACTGGTGGAAGATGTCACTA
CTCATTTGCTTATGTATCTTTGCCATGTGGATGACACTGCCAGTTCATCT
GCCAGCTTGGGGTGGTCCCTCACTCCCTTGAATCACCTTAACAGCAGCTT
TTGATTGCTTCCTCCCTTGGGCCTTCCTTATTACTTAGCTCCTTTTTTGG
TCTGCATTGTAGAATGAAGATCTTTTCCCCATTCTGTAAGCTGTTGTTTT
GTTCTTTTTCTCTTTTTCAAAATGATATTTTCTTCATTTACATTTCAATG
CTATCCCAAAAGTCCCCTATACCCTCCGCCCTGCCCTGCTCCCCAACCCA
CCCACTTCCTAGACCTGGAATTCCCCTGTACTGGGGCATATCATATAATC
TTCACAAGAACTAAGGGCTTTTCTTCTCATCGATGGGCAACTAAGCCATC
CTCTGCTAATATGCAACTACAGAACCAAGTCTGGGAATAACGGGTAGCCC
AAATGTTGTTCCCCGGTTGTTCAAAGAAAGGGCCCTTT

NNNNCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGCCACCAGGTCTAGTGA
GACTGTCTCAAAAAAGAGAGCAAAGTTTGTAGAAGTAAAGCTAAAAGGAA
AAACTGTACAGTAAGGCTACCGAGTGTCTTGTTTGACTTGTTTACCACAC
ATATTCTTAGGTTTTGATAAATTCACATCTTCTTTTTATTTTTTCTCATT
TTCCCAAAATTCAATCTTCTCTCAGTTTACCCATGCTGTGCCTGTTCTTG
AAATGAATCAAATGTGCCTCTTTAGACAATTTCCCCCTGACTACAATGAT
TACTTATTTATTTGCTTGTTTGGTTTTTGAAACAGGCTTGTTTGTTTTGT
GGCTCAGGCTGCCTACAAGTTCAGGATTCTTCTGCCCTGCTTCCTGGGTG
CTGGGATTACAGGCATTTCTGCCCCTAAATTCCTTCCTATAAACATGGTC
ATACAGTGCCATAAAGAATTCTTGGGGGGATAGGATATCCCCCNAATAAA
ATAAAATAAAGTAAAGTAAATAAAATGTTTCGGGTAATTGTACAATATTT
TAGAAAAGAACAAATTTTGAAACCTTTTAAATGAAAAAGGGATGAAAAAA
AAAGGTTTCCTTAAAATTTTCCTAAAAGGGCAAACAGGTTTTGAATTGTT
GAAAATGAAAAAAACTGGAATTTTTAAAAAAGGTGGACAAAAATGCCCAA
GGGGTTAAAAAAAAACCCAACC

Query= MSMg01no340_m23.g1 MSMg01no340_m23.g1 CHROMAT_FILE:
MSMg01no340_m23.g1 PHD_FILE: MSMg01no340_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:54 2005
         (414 letters)



>mm_chr4_109574729_109575542
          Length = 814

 Score =  777 bits (402), Expect = 0.0
 Identities = 411/414 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggccaccaggtctagtgagactgtctcaaaaaagagagcaaagtttgtagaagtaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 caggccaccaggtctagtgagactgtctcaaaaaagagagcaaagtttgtagaagtaaag 426

                                                                       
Query: 61  ctaaaaggaaaaactgtacagtaaggctaccgagtgtcttgtttgacttgtttaccacac 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctaaaaggaaaaactgtacagtgaggctaccgagtgtcttgtttgacttgtttaccacac 366

                                                                       
Query: 121 atattcttaggttttgataaattcacatcttctttttattttttctcattttcccaaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atattcttaggttttgataaattcacatcttctttttattttttctcattttcccaaaat 306

                                                                       
Query: 181 tcaatcttctctcagtttacccatgctgtgcctgttcttgaaatgaatcaaatgtgcctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcaatcttctctcagtttacccatgctgtgcctgttcttgaaatgaatcaaatgtgcctc 246

                                                                       
Query: 241 tttagacaatttccccctgactacaatgattacttatttatttgcttgtttggtttttga 300
           |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 245 tttagacaatttcctcctgactacaatgattatttatttatttgcttgtttggtttttga 186

                                                                       
Query: 301 aacaggcttgtttgttttgtggctcaggctgcctacaagttcaggattcttctgccctgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aacaggcttgtttgttttgtggctcaggctgcctacaagttcaggattcttctgccctgc 126

                                                                 
Query: 361 ttcctgggtgctgggattacaggcatttctgcccctaaattccttcctataaac 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttcctgggtgctgggattacaggcatttctgcccctaaattccttcctataaac 72


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space:   326025
Effective search space used:   326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)