Query= MSMg01no341_f07.b1 MSMg01no341_f07.b1 CHROMAT_FILE:
MSMg01no341_f07.b1 PHD_FILE: MSMg01no341_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:33 2005
(335 letters)
>mm_chr4_130800483_130801217
Length = 735
Score = 588 bits (304), Expect = e-172
Identities = 322/329 (97%), Gaps = 1/329 (0%)
Strand = Plus / Minus
Query: 5 gaattccaacctatccgctgcaggtctgagcccagtgaactgtggctgtccctccctcct 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gaattccaacctaaaggctgcaggtctgagcccagtgaactgtggctgtccctccctcct 312
Query: 65 ggatgtcctgttcttccagtttgtcattcaaacaactgggcttcctcaagggagccggtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggatgtcctgttcttccagtttgtcattcaaacaactgggcttcctcaagggagccggtg 252
Query: 125 ttagtgtctttggcccacaatgcacctctctttctcaggctccaca-tttttttttattc 183
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 251 ttagtgtctttggcccacaatgcacctctctttctcaggctccacattttttttttattc 192
Query: 184 actgtaggaccccaccccacaggatgctgtagctcaacttcagaataagtcgtctctcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 actgtaggaccccaccccacaggatgctgtagctcaacttcagaataagtcgtctctcct 132
Query: 244 taattaacctctctggaaatgccctcatagatacgggtggaagtggggtggaggtgtgac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 taattaacctctctggaaatgccctcatagatacgggtggaagtggggtggaggtgtgac 72
Query: 304 tcctaanntagccaatttgacnatgggat 332
|||||| ||||||||||||| |||||||
Sbjct: 71 tcctaagctagccaatttgacaatgggat 43
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_f07.g1 MSMg01no341_f07.g1 CHROMAT_FILE:
MSMg01no341_f07.g1 PHD_FILE: MSMg01no341_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:33 2005
(413 letters)
>mm_chr4_130614952_130615764
Length = 813
Score = 721 bits (373), Expect = 0.0
Identities = 398/413 (96%), Gaps = 11/413 (2%)
Strand = Plus / Plus
Query: 1 tctggaatcagagagtatcagggcctgattcctgcttctcagcttcctgccaagtcctta 60
||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 212 tctggaatcagagagtatcag-----------tgcttctcagcttcctgccaagtcctta 260
Query: 61 gacagagatgaggtgacctgtagcaggctagagggtgagccaggctgagggggacagagc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gacagagatgaggtgacctgtagcaggctagatggtgagccaggctgagggggacagagc 320
Query: 121 tgtgagtgaagagaccccgtttctgaaggtgagaaaaaagtggaccagagaggtcaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgagtgaagagaccccgtttctgaaggtgagaaaaaagtggaccagagaggtcaacca 380
Query: 181 ttagtcctacacagcccaggcctcatggcagctggcacagggctctgtgccagggagaac 240
||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 381 ttagtcctacacagcccaggccttatagcagctggctcagggctctgtgccagggagaac 440
Query: 241 tggaggaggtaagctactgggaaggagtcaggtgtcactccagggcttttaccttccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaggaggtaagctactgggaaggagtcaggtgtcactccagggcttttaccttccttc 500
Query: 301 tgtcaccactgctgtcactatcactctctttgggatcaaatgctagtctctgaaggtaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtcaccactgctgtcactatcactctctttgggatcaaatgctagtctctgaaggtaga 560
Query: 361 tttgggctgagattaatatataaatcagtacattgctaggactgggtgattgg 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgggctgagattaatatataaatcagtacattgctaggactgggtgattgg 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
