Query= MSMg01no344_c10.b1 MSMg01no344_c10.b1 CHROMAT_FILE:
MSMg01no344_c10.b1 PHD_FILE: MSMg01no344_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:15 2005
(487 letters)
>mm_chr4_124452778_124453669
Length = 892
Score = 824 bits (426), Expect = 0.0
Identities = 478/508 (94%), Gaps = 24/508 (4%)
Strand = Plus / Plus
Query: 4 ggaattctctttgtgc-atatatgtcttctcatttgttttatcatcccttgatgatga-- 60
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggaattctctttgggatatatatgtcttctcatttgttttatcatcccttgatgatgacg 244
Query: 61 ----------------tgatgttacatattttt-agcacgttcctactttttagcactgt 103
||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 245 atgatgatgataatgatgatgttacatattttttagcatgttcctactttttagcactgt 304
Query: 104 caagtatttaaagcttactttgtgtgtttc-gtttctt---agtccttataaagcaatac 159
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 305 caagtatttaaagcttactttgtgtgtttttgtttcttcttagtccttataaagcaatac 364
Query: 160 ttcttaggagcccagttttggaaaatagtattagaagctaaggtctcacatcagatatgc 219
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttcttaggagcccagttttggaaaatagtattagaagctaaggtctcacatcagatatgt 424
Query: 220 atgctgttcttgtgtattcttgcttctcagaggacagcaaaagactatgtgtgtgttagg 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atgctgttcttgtgtattcttgcttctcagaggacagcaaaagactatgtgtgtgttagg 484
Query: 280 ggcagggggaggcataggtttctcctttgagaaagggtctcatgtgtcctacactcaaat 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ggcagggggaggcataggtttctcctttgagaaagggtctcatgtgtcctacactcaaat 544
Query: 340 tcactgtgtagttgagagtgatcttccagcctctgtctccctagtgctagggttgttata 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tcactgtgtagttgagagtgatcttccagcctctgtctccctagtgctagggttgttata 604
Query: 400 aacgaccacacccagtttatatggtgctggggactgaacccagggctttgcatgctggac 459
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aacgaccacacccggtttatatggtgctggggactgaacccagggctttgcatgctggac 664
Query: 460 aagcattcttgcaattgagcaacatccc 487
||||||||||||||||||||||||||||
Sbjct: 665 aagcattcttgcaattgagcaacatccc 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 892
Length adjustment: 10
Effective length of query: 477
Effective length of database: 882
Effective search space: 420714
Effective search space used: 420714
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_c10.g1 MSMg01no344_c10.g1 CHROMAT_FILE:
MSMg01no344_c10.g1 PHD_FILE: MSMg01no344_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:15 2005
(444 letters)
>mm_chr4_124604013_124604856
Length = 844
Score = 571 bits (295), Expect = e-167
Identities = 313/319 (98%), Gaps = 2/319 (0%)
Strand = Plus / Minus
Query: 127 gctgttgtcttagcacacaagctccttcaag-tcgccatatagatattactgagtcttag 185
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 844 gctgttgtcttagcacacaagctccttcaagat-gccatatagatattactgagtcttag 786
Query: 186 gcacttggcagagaaaagcaggtgttaagaacatgtaaactatttatttgcatgaaaatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gcacttggcagagaaaagcaggtgttaagaacatgtaaactatttatttgcatgaaaatt 726
Query: 246 tttctcagagagagctattctaggactcctggaacccttggtctcagtagacagccaaga 305
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aagcacagagagagctattctaggactcctggaacccttggtctcagtagacagccaaga 666
Query: 306 tccaaccttgcagtcaggcctgtggtgttaactcttacactgtgtcagtggcctgccacc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tccaaccttgcagtcaggcctgtggtgttaactcttacactgtgtcagtggcctgccacc 606
Query: 366 agcagtgagctcgaagcctgccgtcattactacagatggtgcaaagttggcagcagtgtc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agcagtgagctcgaagcctgccgtcattactacagatggtgcaaagttggcagcagtgtc 546
Query: 426 ccgcttcctttttaacagc 444
|||||||||||||||||||
Sbjct: 545 ccgcttcctttttaacagc 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
