GGTACGAGTCGGTGGTAATTGCGGGGGCGGTATACGAGTCGCTATTCCGA
GAGGATCCGCGGAATTCCCTTATTACCCAGAGACATTCTGTAAGTTCTGT
GACTCTAGAGAACCCTGGACTAATATACCAGCTTCCCGCCTTTTCCCACA
AATATGATTTCTTTCTTCTTAGTGGGGGAATAATAGCTACTATTCTACAT
TTTCTTCATCCATTGGTGTGGGTTCCCTCACTTGTCTATTGTTAACAATG
CCGTGATAAACCTGGTTTAAAAGCCCCTCTGCTGTCTGCTGGTCTGAAAC
TTTTTTAAAATTTGCTTATCATACCTGACTATTAGAGCATTTTTAAGAAA
AAAAAACTTGTCTTGAAATCCCTCATTAGAATTAAATTTTGGGATTCAAA
CATGGAGTACACTCCTTGATTGTAGCACTAGGAAGATCATGAATTCAAGG
TCAACATGGGCTGCATAGCAAGATTCTGCCTTAAAATGACCTAGCCAAGT
AAATGAATTAGGCTGGTGAATTAACATATGCATGTAGACAGTTATTTGAA
CCTAATAAAATTCTTAATTTTTGCAAATCTCTGAAGCAGAACCGGAATTG
TGGACACTTTGTCATAACGTGGTTCCGCACGAGGTCTCAACTGGATGACC
ATCTGGTCCCCTAAAAACTATGTCTAAGTGACTTCCGCATAAAATTCTTT
TTTTGGAGCTATTTGTGGGTGGCCTGGGTGTGGGTGAAGTTTATTC

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAAACCAACTGTTTACAAACATGCT
TCACATCTCAAAGAACTAGAACAACAACCTAAACCCCAAGTCAGAAGAAA
AAGATAGCAAAGATCAGGACAAAACCTAAATAAAGAATAGGAAAAAAAAA
AAAAGAACAGAATAAGTCAATAAAACTACGAATTGCTTTTTAAAGGTTCA
ACAAAATTTACCAACTTTTAGCTAGTCAACCTGAGAAACACTCAAAAAAT
CATGTTTAAAAATAATACAATTGATGTCACATAAATAAATAAAAAATTAA
TAGGGATGATTTGGGAAAAGCCTACGTTTAAAAAAAAGGCTAACCTAGAA
AAATAGATAAGTTTTAAGAAACACAAAGACTGAATCATAAAGAGATTAAA
ATATGAGCAGACATAACCAGTAAGTAGATTCAATCAGTAATCAAACCCTC
CCCAAAATGAAAGCCTAGGACCAGATGGCTTCACTGGAGAATTCAACCAA
ACATTTAAAGAAGAATTAACACTAATCCTTTTCAAACTCTTTCCCCTCAA
AAAAAAAAAAAAAACCCTGAAGAGTATGGAGTACTTCCAAAATAACCTTT
AGCAGCCAACATTATCCCAGATTAGCAAAATCAGATGGACTATTAAAAAA
CTATGAATTAATTATCCTGGATAAATA

Query= MSMg01no344_f02.b1 MSMg01no344_f02.b1 CHROMAT_FILE:
MSMg01no344_f02.b1 PHD_FILE: MSMg01no344_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:27 2005
         (520 letters)



>mm_chr4_127594099_127595018
          Length = 920

 Score =  961 bits (497), Expect = 0.0
 Identities = 515/521 (98%), Gaps = 2/521 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agagacattctgtaagttctgtgactctagagaaccctggactaatataccagcttcccg 60
           |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| 
Sbjct: 201 agagacattctgtaagttctgtgactctggagaaccctg-actaatataccagcttcccc 259

                                                                       
Query: 61  ccttttcccacaaatatgatttctttcttcttagtgggggaataatagctactattctac 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 260 ccttttcccacagatatgatttctttcttcttagtgggggaataatagctattattctac 319

                                                                       
Query: 121 attttcttcatccattggtgtgggttccctcacttgtctattgttaacaatgccgtgata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attttcttcatccattggtgtgggttccctcacttgtctattgttaacaatgccgtgata 379

                                                                       
Query: 181 aacctggtttaaaagcccctctgctgtctgctggtctgaaacttttttaaaatttgctta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aacctggtttaaaagcccctctgctgtctgctggtctgaaacttttttaaaatttgctta 439

                                                                       
Query: 241 tcatacctgactattagagcatttttaagaaaaaaaaa-cttgtcttgaaatccctcatt 299
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 tcatacctgactattagagcatttttaagaaaaaaaaaacttgtcttgaaatccctcatt 499

                                                                       
Query: 300 agaattaaattttgggattcaaacatggagtacactccttgattgtagcactaggaagat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agaattaaattttgggattcaaacatggagtacactccttgattgtagcactaggaagat 559

                                                                       
Query: 360 catgaattcaaggtcaacatgggctgcatagcaagattctgccttaaaatgacctagcca 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catgaattcaaggtcaacatgggctgcatagcaagattctgccttaaaatgacctagcca 619

                                                                       
Query: 420 agtaaatgaattaggctggtgaattaacatatgcatgtagacagttatttgaacctaata 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agtaaatgaattaggctggtgaattaacatatgcatgtagacagttatttgaacctaata 679

                                                    
Query: 480 aaattcttaatttttgcaaatctctgaagcagaaccggaat 520
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaattcttaatttttgcaaatctctgaagcagaaccggaat 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space:   464100
Effective search space used:   464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)