XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAC
CTGACGCATATCGAATGACAGAGAAGCACCTGAAAAAATGTTCAACATCC
TTAATCATCAGGGAAATGCAACTCAAATCAACCCTGAGATTCCACCTCAC
ACCAGTCAGAATGGCTAAGATGAAAAATTCAGGTGACAGCAGATGCTGGC
GAGGATGTGGAGAAAGAGGAACACTCCTTCATTGTTGGTGGGATTGCAAG
CTTGTACAACCACTCTGGAAATCACTTTGGCGGTTCCTCAGAAAATTGGA
CATAATACTACCAGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAG
AAGATGTTCCAACCAGTAAGAAGAACACATGCCCCACTATGTTCATAGCA
GCCTTATTTATAATAGCCAGCAGCTGGAAAGAACCCAGATGCCCCTCAAC
AGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACT
CAGCTATTAAAAGGAATGAATTTATGAAATTCCTAGTCAAATGGTTGGAC
CTGGAGGGCATCATCCTGAGTGAGGTAACATAATCACAAAGGAACTCACA
CAATATGTACTCACTGATAAGTGGATATCAGCCCAAAAACTTAGGATACC
CAAGATATAAGATACNATTTGTTAAACGCATGAAACTCANGAAGAAGGAA
GACCAAGTGTGGAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXTGTGGGAAATATGCAGACTGACCCGCACATAAGGAACAAGGCAAAC
ATCACAGCATGGGATGGGAGGGAAGTTAAAATGAAATGTTTGCAGCTCTG
TGCATGGTTCTTTTAAAACCTTCCATAGGTGGTATGTGCTGTGCTGACAG
CAGAATCCCCTTTTTACAGTTAGGGCACTGTTTAGAGTTAGACACTGCCT
GAACATGATTCTCTGCAGATTCAGAATCCATTAAATATTGTGGGAAAATA
ACATGTATTTTTTTTTGAGACTTTACCACTTAAATCAATTTTCTTTTACT
ATAAAACACCATAATAAATGGTGGAAGAGGTAGACTGGGTTTAGTAATCA
TTGTCATCTGATGTCTTAGTAATAAATGGGATCCAAACTGTGCTGTCAGA
GGTCAATGTCAAATCTTCTGCGTTAGCTGATCAGCTGCCAACATTATCAC
CACTGCTGCCTTTAACAACAGAAAGAATGTACACTTACAATTATAAGCAT
TGCTCTTTTATTAACTTCTCTGAGATCTATTAAAACTTTATGTTCTCTGA
AAAGAAAGATTCTTGGATATGCATTAACGAACTCCCATATTTTTAAAACT
ATATAACTATTTACCAATTTTGATGATACTGGTACTCCTTTTTTGAATAA
AAG

Query= MSMg01no345_m15.g1 MSMg01no345_m15.g1 CHROMAT_FILE:
MSMg01no345_m15.g1 PHD_FILE: MSMg01no345_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:19 2005
         (478 letters)



>mm_chr4_28118009_28118885
          Length = 877

 Score =  884 bits (457), Expect = 0.0
 Identities = 472/477 (98%), Gaps = 1/477 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgggaaatatgcagactgacccgcacataaggaacaaggcaaacatcacagcatggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgggaaatatgcagactgacccgcacataaggaacaaggcaaacatcacagcatggga 260

                                                                       
Query: 61  tgggagggaagttaaaatgaaatgtttgcagctctgtgcatggttcttttaaaaccttcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggagggaagttaaaatgaaatgtttgcagctctgtgcatggttcttttaaaaccttcc 320

                                                                       
Query: 121 ataggtggtatgtgctgtgctgacagcagaatcccctttttacagttagggcactgttta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataggtggtatgtgctgtgctgacagcagaatcccctttttacagttagggcactgttta 380

                                                                       
Query: 181 gagttagacactgcctgaacatgattctctgcagattcagaatccattaaatattgtggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagttagacactgcctgaacatgattctctgcagattcagaatccattaaatattgtggg 440

                                                                       
Query: 241 aaaataacatgtatttttttttgagactttaccacttaaatcaattttcttttactataa 300
           ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaataacagggatttttttt-gagactttaccacttaaatcaattttcttttactataa 499

                                                                       
Query: 301 aacaccataataaatggtggaagaggtagactgggtttagtaatcattgtcatctgatgt 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaaaccataataaatggtggaagaggtagactgggtttagtaatcattgtcatctgatgt 559

                                                                       
Query: 361 cttagtaataaatgggatccaaactgtgctgtcagaggtcaatgtcaaatcttctgcgtt 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 560 cttagtaataaatgggatccaaactgtgctgtcagaggtcaatgtcaaatcttcagcgtt 619

                                                                    
Query: 421 agctgatcagctgccaacattatcaccactgctgcctttaacaacagaaagaatgta 477
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agctgatcagctgccaacattatcaccactgctgcctttaacaacagaaagaatgta 676


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 877
Length adjustment: 10
Effective length of query: 468
Effective length of database: 867
Effective search space:   405756
Effective search space used:   405756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)