CCCCCCCTCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCAGAAGTCTCCCATTGTCTATACAACACTTTCTTTAG
CCTAAAAATAATGAGGCTCCAGATCTAGCTACAATATACCACTTATCCCC
TGAGAGGCTCTGCCAATGCCTGACAAATACAGAAGGAGATGCTCACAGCA
ATCCACTGGACTGAGCACAGGGTCCCCAATGAAGGAGCTAAAGAAAAGAC
CCAAGGAGATCAAGGGGTTTACAGCTCTATAGGAAGAACAACAATATGAA
CTAACAAATGCCCCCAGAGCACCCAAGGACTAAACCACTAACCAAAGAAT
ACACATGGTGGGACTCATGGCTCCAGCTATATATGTAGCAGAGGATGGAC
TAGTTGAACATCAAAAGGAGAAGAGGCCCTTGGTCCTGTGAAAGCTCTAT
GCCCCAGTATAGGGAGATGCCAGGGCCAGGAAGCAGGAGTGGGTATGTTG
GTGAGCAGGGGGAGGGAGGCGGTTATAACGCGAGCCCCTCCTTTCTTTTC
TACTTTCTCCTTCCTCTCCTTCATCCTTTCCCTCTCTCCCCTTACTTTTC
TTTCATCCTTCTCCAATTTTCCCCACCTCCCCTATCTCACCTCTCTCCCC
TCCCCCTTCCCTCCTTTTTTTTTTCTTTTCCCTCCCCTTACCTCTTTCCC
TCTTCCCCTCCCTTCTCCCTTCTTTTTCTCTCTTTTCCCTCTTTAATTCC
CTACTCTTCTCTCCTTTCG

CCCCTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCTTCTAATGAATTGCC
CACAGCAGTGTGCAAGATGCTAAGCGGTTGTCAGGGTGAGGGAAACACTG
CCCATTGTGGTTTGCACTAACAGAGTTTTGTAAAACTTGAGTTGCTTCAT
CCTAACCTCCAATTGGAGATCTCTGTGCTGTCTGTTGGGGAAAAGGGTTT
TGCTAAATCACGATCGTGGTGATTCATAAAGTAAGAAATGGGAAGCCTGA
TCTTTGCTATATACATAGCCACTCTTCGCTTTCACTTCTTCCACAGTTAA
CTGAGCACATGTGGCTTCCTGTGACCCAGTATATAGCATAGATCTTAGGT
TAGGACTTGCCTATTATTGGACTATCTTTTTGTATTATTTATGCCCATTC
TATTTGAAAAAGGATTTGCGGCAGCTATTATATCATACGCTTCATTATCT
TTAATAAATCACTTTGGTAGAATAGACAATGGCTTATTGTACAGATGGTT
AGTTTCTATGATAAATGTTTAACATATGCATTTTCCTGGATCCCCTTGAA
TGCTATTTTACGTTCACAACACTTTGAAAATGAAAAGGCCACTTTAAGAA
AAAAAACTTATGGTACTATCTACTCCGTCCTATACACTTAAATACAAAAC
CCCCGTAGCAACACCATGCCCTTCCCCCTTTTCCTTCACTCCCCCTTATC
TTTCCCTTCCTTCG

Query= MSMg01no352_k07.g1 MSMg01no352_k07.g1 CHROMAT_FILE:
MSMg01no352_k07.g1 PHD_FILE: MSMg01no352_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:16 2005
         (437 letters)



>mm_chr4_76083566_76084402
          Length = 837

 Score =  822 bits (425), Expect = 0.0
 Identities = 434/437 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcttctaatgaattgcccacagcagtgtgcaagatgctaagcggttgtcagggtgaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atcttctaatgaattgcccacagcagtgtgcaagatgctaagcggttgtcagggtgaggg 578

                                                                       
Query: 61  aaacactgcccattgtggtttgcactaacagagttttgtaaaacttgagttgcttcatcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aaacactgcccattgtggtttgcactaacagagttttgtaaaacttgagttgcttcatcc 518

                                                                       
Query: 121 taacctccaattggagatctctgtgctgtctgttggggaaaagggttttgctaaatcacg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 taacctccaattggagatctctgtgctgtctgttggggaaaagggttttgctaaatcacg 458

                                                                       
Query: 181 atcgtggtgattcataaagtaagaaatgggaagcctgatctttgctatatacatagccac 240
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 457 atcgtggtgattcataaagtaagaaatggggagcctgatctttgctatatacatagccac 398

                                                                       
Query: 241 tcttcgctttcacttcttccacagttaactgagcacatgtggcttcctgtgacccagtat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tcttcgctttcacttcttccacagttaactgagcacatgtggcttcctgtgacccagtat 338

                                                                       
Query: 301 atagcatagatcttaggttaggacttgcctattattggactatctttttgtattatttat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atagcatagatcttaggttaggacttgcctattattggactatctttttgtattatttat 278

                                                                       
Query: 361 gcccattctatttgaaaaaggatttgcggcagctattatatcatacgcttcattatcttt 420
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 277 gcccattctatttgaaaaaggatttgtggcagctattaaatcatacgcttcattatcttt 218

                            
Query: 421 aataaatcactttggta 437
           |||||||||||||||||
Sbjct: 217 aataaatcactttggta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)